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Protein
Submitted name:

ATP-binding cassette transporter, subfamily F, member 1 protein PpABCF1

Gene

ppabcf1

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi213 – 220ATPPROSITE-ProRule annotation8
Nucleotide bindingi550 – 557ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

LigandATP-bindingPROSITE-ProRule annotationImported, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-binding cassette transporter, subfamily F, member 1 protein PpABCF1Imported
Gene namesi
Name:ppabcf1Imported
ORF Names:PHYPA_004828Imported, PHYPADRAFT_208576Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
Proteomesi
  • UP000006727 Componenti: Chromosome 3

Interactioni

Protein-protein interaction databases

STRINGi3218.PP1S47_97V6.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini181 – 449ABC transporterInterPro annotationAdd BLAST269
Domaini517 – 726ABC transporterInterPro annotationAdd BLAST210

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili138 – 158Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0062 Eukaryota
COG0488 LUCA
InParanoidiA9S4D8
OMAiEHEWAGD

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR032781 ABC_tran_Xtn
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00005 ABC_tran, 2 hits
PF12848 ABC_tran_Xtn, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS00211 ABC_TRANSPORTER_1, 2 hits
PS50893 ABC_TRANSPORTER_2, 2 hits

Sequencei

Sequence statusi: Complete.

A9S4D8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVSAEADVTV EQGFLEVVGD RIKDVDSIII DYVVKVLQDE TFDFGPEGKE
60 70 80 90 100
AYDAVGALLV AAELVDDEKQ AKVLCAKLAS RFGARGGDKS QESFRKMAAP
110 120 130 140 150
VRMSDGMAGS APAAKLEDPQ TLPEISERDL AKIERRRRKE ERQRLADYQA
160 170 180 190 200
HVAAAEAANV GMPAVMVNHG GVGEGAVAKD IRMENFSISM GGRELINEAT
210 220 230 240 250
VTLAHGRRYG LVGRNGTGKT TLLKHMAMHA IDGIPRNCQI LHVEQEVVGD
260 270 280 290 300
DTTVLQCVLD SDVERKLLME EEAQLAQQKA TVPTSTEGTT LVKADGKIAE
310 320 330 340 350
NAGDKEDPVS ARLAQIYKRL ELIDAYSAEA RASAILAGLS FTADMQTRKT
360 370 380 390 400
RTFSGGWRMR IALARALFIE PDLLLLDEPT NHLDLHAVLW LESYLLKWPK
410 420 430 440 450
TLIVVSHARE FLNSVVTDIL LLQNQKIVTY KGDYDTFERT RDERVRNQMK
460 470 480 490 500
AHEANERTRS HIQAFVDKFR YNAKRASLVQ SRIKALERIG HVDAVVNDPD
510 520 530 540 550
YKFEFPTPED KPQAPIISFS DASFGYPGGP ILFKNLNFGI DLDSRLAMVG
560 570 580 590 600
PNGIGKSTLL KLISGELEPI SGTVFRSAKV RMAVFSQHHV DGLDLSSTPL
610 620 630 640 650
LYMAHCFPGV LEQRLRAHLG SFGITGNLAL QSMYTLSGGQ KSRVAFAKIT
660 670 680 690 700
FNKPHILLLD EPSNHLDLDA VEALIQGLAL FQGGVLMVSH DEHLISGSVD
710 720
ELWCVSDGKA TPFHGTFAEY KKTLKI
Length:726
Mass (Da):79,914
Last modified:February 5, 2008 - v1
Checksum:iB78BF1A3A6FD3456
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544936 Genomic DNA Translation: EDQ73984.1
ABEU02000003 Genomic DNA Translation: PNR57834.1
RefSeqiXP_001761262.1, XM_001761210.1

Genome annotation databases

EnsemblPlantsiPNR57834; PNR57834; PHYPA_004828
GrameneiPNR57834; PNR57834; PHYPA_004828

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544936 Genomic DNA Translation: EDQ73984.1
ABEU02000003 Genomic DNA Translation: PNR57834.1
RefSeqiXP_001761262.1, XM_001761210.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3218.PP1S47_97V6.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPNR57834; PNR57834; PHYPA_004828
GrameneiPNR57834; PNR57834; PHYPA_004828

Phylogenomic databases

eggNOGiKOG0062 Eukaryota
COG0488 LUCA
InParanoidiA9S4D8
OMAiEHEWAGD

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR032781 ABC_tran_Xtn
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00005 ABC_tran, 2 hits
PF12848 ABC_tran_Xtn, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS00211 ABC_TRANSPORTER_1, 2 hits
PS50893 ABC_TRANSPORTER_2, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA9S4D8_PHYPA
AccessioniPrimary (citable) accession number: A9S4D8
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: November 7, 2018
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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