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Protein
Submitted name:

Uncharacterized protein

Gene

POPTR_011G142200v3

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:POPTR_011G142200v3Imported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
Proteomesi
  • UP000006729 Componenti: Chromosome 11

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei111 – 130HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi3694.POPTR_0011s14540.1

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IX24 Eukaryota
ENOG4112AV0 LUCA
HOGENOMiHOG000242632
KOiK03541
OMAiEEEWSPG
OrthoDBiEOG09360SNS

Family and domain databases

InterProiView protein in InterPro
IPR006814 PSII_PsbR
PANTHERiPTHR34369 PTHR34369, 1 hit
PfamiView protein in Pfam
PF04725 PsbR, 1 hit

Sequencei

Sequence statusi: Complete.

A9PHU8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAASVMASLN LKPSPFTVEK SSVRGLPTLS RRSFKIEASG VKKIKTDTPY
60 70 80 90 100
GTGGGMNLRN GLDASGRKPR GKGVYQYVDK YGANVDGYSP IYNADEWSPS
110 120 130
GDVYAGGKTG LLIWAVTLAG ILAGGALLVY TTSALAQ
Length:137
Mass (Da):14,336
Last modified:February 5, 2008 - v1
Checksum:iB67D43206AD91A08
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF147954 mRNA Translation: ABK95951.1
CM009300 Genomic DNA Translation: PNT13432.1
RefSeqiXP_002317015.1, XM_002316979.2
XP_006377857.1, XM_006377795.1
UniGeneiPth.17376

Genome annotation databases

EnsemblPlantsiPNT13432; PNT13432; POPTR_011G142200v3
GeneIDi7454978
GrameneiPNT13432; PNT13432; POPTR_011G142200v3
KEGGipop:7454978

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF147954 mRNA Translation: ABK95951.1
CM009300 Genomic DNA Translation: PNT13432.1
RefSeqiXP_002317015.1, XM_002316979.2
XP_006377857.1, XM_006377795.1
UniGeneiPth.17376

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3694.POPTR_0011s14540.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPNT13432; PNT13432; POPTR_011G142200v3
GeneIDi7454978
GrameneiPNT13432; PNT13432; POPTR_011G142200v3
KEGGipop:7454978

Phylogenomic databases

eggNOGiENOG410IX24 Eukaryota
ENOG4112AV0 LUCA
HOGENOMiHOG000242632
KOiK03541
OMAiEEEWSPG
OrthoDBiEOG09360SNS

Family and domain databases

InterProiView protein in InterPro
IPR006814 PSII_PsbR
PANTHERiPTHR34369 PTHR34369, 1 hit
PfamiView protein in Pfam
PF04725 PsbR, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA9PHU8_POPTR
AccessioniPrimary (citable) accession number: A9PHU8
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: October 10, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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