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Protein
Submitted name:

Uncharacterized protein

Gene

POPTR_019G049500v3

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:POPTR_019G049500v3Imported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
Proteomesi
  • UP000006729 Componenti: Chromosome 19

Expressioni

Gene expression databases

ExpressionAtlasiA9PGE3 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi3694.POPTR_0019s07600.1

Structurei

3D structure databases

SMRiA9PGE3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini54 – 469AMP-bindingInterPro annotationAdd BLAST416
Domaini478 – 553AMP-binding_CInterPro annotationAdd BLAST76

Phylogenomic databases

eggNOGiKOG1176 Eukaryota
COG0318 LUCA
HOGENOMiHOG000230009
KOiK01904
OMAiWLMQRAF
OrthoDBiEOG093606MC

Family and domain databases

InterProiView protein in InterPro
IPR025110 AMP-bd_C
IPR020845 AMP-binding_CS
IPR000873 AMP-dep_Synth/Lig
PfamiView protein in Pfam
PF00501 AMP-binding, 1 hit
PF13193 AMP-binding_C, 1 hit
PROSITEiView protein in PROSITE
PS00455 AMP_BINDING, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

A9PGE3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MMSVATVEPP KPELSPPQNQ NAPSSHETDH IFRSKLPDIT ISNHLPLHAY
60 70 80 90 100
CFENLSDFSD RPCLISGSTG KTYSFAETHL ISRKVAAGLS NLGIKKGDVI
110 120 130 140 150
MTLLQNCPEF VFSFMGASMI GAVTTTVNPF YTPGEIFKQF SASRAKLIIT
160 170 180 190 200
QSQHVNKLRD SDCHENNQKP EEDFIVITID DPPENCLHFN VLVEANESEM
210 220 230 240 250
PTVSIHPDDP VALPFSSGTT GLPKGVILTH KSLITSVAQQ VDGEIPNLYL
260 270 280 290 300
KQDDVVLCVL PLFHIFSLNS VLLCSLRAGS AVLLMQKFEI GSLLELIQKH
310 320 330 340 350
NVSVAAVVPP LVLALAKNPM VANFDLSSIR VVLSGAAPLG KELEEALRSR
360 370 380 390 400
VPQAILGQGY GMTEAGPVLS MCLAFSKQPL PTKSGSCGTV VRNAELKVID
410 420 430 440 450
PETGSSLGRN QPGEICIRGS QIMKGYLNDA EATANIIDVE GWLHTGDIGY
460 470 480 490 500
VDDDDEIFIV DRVKEIIKFK GFQVPPAELE ALLVNHPSIA DAAVVPQKDE
510 520 530 540 550
VAGEVPVAFV VRSNDLDLNE EAVKDYIAKQ VVFYKKLHKV FFVHSIPKSA
560 570
AGKILRKDLR AKLATATTMS
Length:570
Mass (Da):61,923
Last modified:February 5, 2008 - v1
Checksum:iDCC135A293FFB5C7
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2K1WPX2A0A2K1WPX2_POPTR
Uncharacterized protein
POPTR_019G049500v3
555Annotation score:
A0A2K1WPT6A0A2K1WPT6_POPTR
Uncharacterized protein
POPTR_019G049500v3
579Annotation score:
A0A2K1WPT5A0A2K1WPT5_POPTR
Uncharacterized protein
POPTR_019G049500v3
433Annotation score:
A0A2K1WPT1A0A2K1WPT1_POPTR
Uncharacterized protein
POPTR_019G049500v3
496Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF147433 mRNA Translation: ABK95446.1
CM009308 Genomic DNA Translation: PNS90542.1
RefSeqiXP_002325815.1, XM_002325779.2
UniGeneiPth.3488

Genome annotation databases

EnsemblPlantsiPNS90542; PNS90542; POPTR_019G049500v3
GeneIDi7469843
GrameneiPNS90542; PNS90542; POPTR_019G049500v3
KEGGipop:7469843

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF147433 mRNA Translation: ABK95446.1
CM009308 Genomic DNA Translation: PNS90542.1
RefSeqiXP_002325815.1, XM_002325779.2
UniGeneiPth.3488

3D structure databases

SMRiA9PGE3
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3694.POPTR_0019s07600.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPNS90542; PNS90542; POPTR_019G049500v3
GeneIDi7469843
GrameneiPNS90542; PNS90542; POPTR_019G049500v3
KEGGipop:7469843

Phylogenomic databases

eggNOGiKOG1176 Eukaryota
COG0318 LUCA
HOGENOMiHOG000230009
KOiK01904
OMAiWLMQRAF
OrthoDBiEOG093606MC

Gene expression databases

ExpressionAtlasiA9PGE3 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR025110 AMP-bd_C
IPR020845 AMP-binding_CS
IPR000873 AMP-dep_Synth/Lig
PfamiView protein in Pfam
PF00501 AMP-binding, 1 hit
PF13193 AMP-binding_C, 1 hit
PROSITEiView protein in PROSITE
PS00455 AMP_BINDING, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA9PGE3_POPTR
AccessioniPrimary (citable) accession number: A9PGE3
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: November 7, 2018
This is version 77 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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