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Entry version 64 (17 Jun 2020)
Sequence version 1 (05 Feb 2008)
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Protein
Submitted name:

Uncharacterized protein

Gene

SARI_02603

Organism
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
SENT882884:G1GAH-2560-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:SARI_02603Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSalmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri41514 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeSalmonella
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002084 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini474 – 575T6SS_VgrInterPro annotationAdd BLAST102
Domaini603 – 728DUF2345InterPro annotationAdd BLAST126
Domaini912 – 1053Pyosin/cloacin_T_domInterPro annotationAdd BLAST142

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni819 – 844DisorderedSequence analysisAdd BLAST26

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili555 – 589Sequence analysisAdd BLAST35

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi819 – 837PolyampholyteSequence analysisAdd BLAST19

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4105CS6 Bacteria
COG3501 LUCA
COG4253 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_271250_0_0_6

KEGG Orthology (KO)

More...
KOi
K11904

Identification of Orthologs from Complete Genome Data

More...
OMAi
SHVGPAH

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00085 HNHc, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.40.50.230, 1 hit
3.90.540.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR037146 Colicin/pyocin_DNase_dom_sf
IPR018769 DUF2345_Vgr_C
IPR003615 HNH_nuc
IPR016128 Pyosin/cloacin_T_dom
IPR036302 Pyosin/cloacin_T_dom_sf
IPR028244 T6SS_Rhs_Vgr_dom
IPR017847 T6SS_RhsGE_Vgr_subset
IPR006533 T6SS_Vgr_RhsGE
IPR037026 Vgr_OB-fold_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF10106 DUF2345, 1 hit
PF06958 Pyocin_S, 1 hit
PF13296 T6SS_Vgr, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF69369 SSF69369, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR01646 vgr_GE, 1 hit
TIGR03361 VI_Rhs_Vgr, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A9MMY5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDNWLALFDG QTRYFLDIND SSVKPDVLRF YGREALSEPF RWDIEFTTLQ
60 70 80 90 100
ANIPPEQVLM KYASFRMRSG KSVHGMVTRL EWLSTSKDQS HYRLTLSSRL
110 120 130 140 150
ALLGYTRQCA VYQNQSVPEV VEQVLRKHGL EGPDFEFRLE HTYPPREIIT
160 170 180 190 200
QWQETDLQFI QRILSEVGIY WRTMMDDVRD LDTYIFADSQ LNYQFDVRLP
210 220 230 240 250
YSEPSGLFDG AAESVWDVRT WHNIATGTVV TRDYNYRTAT TPMDAAVSVR
260 270 280 290 300
SDAVTTGEHY RYAAPYREAG DDASPEPETE SGAFYARLHH ERELNRSARI
310 320 330 340 350
HLFSNAAHLT PGQVLEPQGD VITALQEGVF LTLVTFRGAR DSRLHVSVWG
360 370 380 390 400
QPYTERYCFR PVEIPRPVIP GTLPARIESR EKNDTYAHLD EQGRYRVKLD
410 420 430 440 450
FDREGTESGY GYLWLRMAKP YAGDTLGWHT PLTDGTEVAI AYSNGDIDLP
460 470 480 490 500
YIAYALHDSE HPDHVNRDNH TRNVLRTPAN NKLRMEDRRG EEHIKLATEY
510 520 530 540 550
GKTQLNSGHL VNSKGETRGR GAELRTDEWG TLRAGKGLFV SADAQAKAQG
560 570 580 590 600
EVLDMSAALE EIDRLNQQLQ QMEIAAEQAQ ALKADVDSQI RMFEQRLKPL
610 620 630 640 650
SEALLMSAPE GMALTSGEHM QMTATKNVAI NAGGDASIGA MGNMTALAGD
660 670 680 690 700
KLGLFARTGQ LSMKASEGPV EMQAQNAAMR LFAEKKLTMS SASDISFAGK
710 720 730 740 750
KRITLVGGGS YLRLEAGKVE YGTTASYLRK VKRTMAASAS AKPVQAVSLP
760 770 780 790 800
PPATMREFNP ETLAPWVTPV YAKSCLKEKG CTDAGTAEEP VDNFGQMTIF
810 820 830 840 850
AQPVEDDCCG YGHQHEHADD EVVQHAQSAK KRKPDAGGEN APAQATAAPL
860 870 880 890 900
ALGAATGLMT QVWGEWSLTG ALGAARGIPY VGAMMSALYV PSAGEGSDRV
910 920 930 940 950
PGRDEFWYEE ELRQKSLTGA KATTRVRFFW RQDEQGNMRV YGVHTGEGTP
960 970 980 990 1000
YEGVRTAEMK WVEKNSRYEF KPAHGADVPL ITWTPERPEG GDLPAHTGSD
1010 1020 1030 1040 1050
IKPIDQATIL VTPIPDGKDE YTTPPFPMPE ERDLNDYILV FPAGSGIKPV
1060 1070 1080 1090 1100
YVYLKDDSRN QPGTATGNGV KLSGDKPWLD LSVTNKGNGA PIPSHIADKL
1110 1120 1130 1140 1150
RGRSYGSFDD LREDLWEEIS NDPKLMAQFG EDNQERISNG LAPWVPSDGY
1160 1170 1180 1190
YHGPNEVVKK FQIHHDQAIE DGGGVYDLDN LRIVTPRLHD EIHYRR
Length:1,196
Mass (Da):133,339
Last modified:February 5, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i84A5985D35DD9598
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP000880 Genomic DNA Translation: ABX22460.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ABX22460; ABX22460; SARI_02603

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ses:SARI_02603

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000880 Genomic DNA Translation: ABX22460.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiABX22460; ABX22460; SARI_02603
KEGGises:SARI_02603

Phylogenomic databases

eggNOGiENOG4105CS6 Bacteria
COG3501 LUCA
COG4253 LUCA
HOGENOMiCLU_271250_0_0_6
KOiK11904
OMAiSHVGPAH

Enzyme and pathway databases

BioCyciSENT882884:G1GAH-2560-MONOMER

Family and domain databases

CDDicd00085 HNHc, 1 hit
Gene3Di2.40.50.230, 1 hit
3.90.540.10, 1 hit
InterProiView protein in InterPro
IPR037146 Colicin/pyocin_DNase_dom_sf
IPR018769 DUF2345_Vgr_C
IPR003615 HNH_nuc
IPR016128 Pyosin/cloacin_T_dom
IPR036302 Pyosin/cloacin_T_dom_sf
IPR028244 T6SS_Rhs_Vgr_dom
IPR017847 T6SS_RhsGE_Vgr_subset
IPR006533 T6SS_Vgr_RhsGE
IPR037026 Vgr_OB-fold_dom_sf
PfamiView protein in Pfam
PF10106 DUF2345, 1 hit
PF06958 Pyocin_S, 1 hit
PF13296 T6SS_Vgr, 1 hit
SUPFAMiSSF69369 SSF69369, 1 hit
TIGRFAMsiTIGR01646 vgr_GE, 1 hit
TIGR03361 VI_Rhs_Vgr, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA9MMY5_SALAR
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A9MMY5
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: June 17, 2020
This is version 64 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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Main funding by: National Institutes of Health

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