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Protein
Submitted name:

Transcriptional regulator, LysR-family

Gene

Bpet1172

Organism
Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi22 – 41H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, LysR-familyImported
Gene namesi
Ordered Locus Names:Bpet1172Imported
OrganismiBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)Imported
Taxonomic identifieri340100 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
Proteomesi
  • UP000001225 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi340100.Bpet1172

Structurei

3D structure databases

ProteinModelPortaliA9IC03
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 62HTH lysR-typeInterPro annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG4106PZ8 Bacteria
ENOG410XSUY LUCA
HOGENOMiHOG000233522
OMAiPPERGNL
OrthoDBiPOG091H0MCG

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

A9IC03-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTHPEWNDL KVFLAVARLG TISDAGEKLG IEHSTVSRRI DRLEATLRVV
60 70 80 90 100
LFDRRRSGYS LTDAGHALIP HAEKMESALL AAVGESLEAA DFIKGNVRVG
110 120 130 140 150
TPEAFGIHVL APGMAQLRQK HPGLRIELMA QPQFPSLVTR EVEILVTLDP
160 170 180 190 200
PQMGRYKVAK LAQIDYFLYC SPAYRDAHPP IRELSDVAQH DFLDYIHDGS
210 220 230 240 250
VSERYRVLEE LVLEPNRCFS SNSVLAQRSA AAAGLGLVLL TPYVANVNSG
260 270 280 290 300
DLISVFPDKP LITRSLWIAA PEDLLRIKRY QFAWRFIREQ VESQPELFHP

PA
Length:302
Mass (Da):33,798
Last modified:February 5, 2008 - v1
Checksum:iE6AF567AF9C62E01
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM902716 Genomic DNA Translation: CAP41506.1

Genome annotation databases

EnsemblBacteriaiCAP41506; CAP41506; Bpet1172
KEGGibpt:Bpet1172

Similar proteinsi

Entry informationi

Entry nameiA9IC03_BORPD
AccessioniPrimary (citable) accession number: A9IC03
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: January 31, 2018
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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