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Protein
Submitted name:

Mammalian BCL (B cell lymphoma) gene homologs

Gene

bcl-11

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Mammalian BCL (B cell lymphoma) gene homologsImported
Gene namesi
Name:bcl-11Imported
ORF Names:CELE_F13H6.1Imported, F13H6.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF13H6.1b ; CE41996 ; WBGene00017430 ; bcl-11

PTM / Processingi

Proteomic databases

EPDiA9D4E4
PaxDbiA9D4E4
PeptideAtlasiA9D4E4

Expressioni

Gene expression databases

BgeeiWBGene00017430 Expressed in 4 organ(s), highest expression level in multi-cellular organism

Interactioni

Protein-protein interaction databases

IntActiA9D4E4, 3 interactors
STRINGi6239.F13H6.1b.2

Structurei

3D structure databases

ProteinModelPortaliA9D4E4
SMRiA9D4E4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini498 – 525C2H2-typeInterPro annotationAdd BLAST28
Domaini526 – 553C2H2-typeInterPro annotationAdd BLAST28
Domaini556 – 587C2H2-typeInterPro annotationAdd BLAST32

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili385 – 412Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063542
HOGENOMiHOG000021483
InParanoidiA9D4E4
OMAiHGLRICE
OrthoDBiEOG091G02IT
PhylomeDBiA9D4E4

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A9D4E4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSGRSKSQT IETSSAGRRR RKANSEVDSG AEEPTATSSS DDKSDYRLDL
60 70 80 90 100
KKRLTTFLTS NSQMASSDSG VSGVESTVEH DLSELKASDS PMSHDGADSP
110 120 130 140 150
RPELDRTDIV VCGECHTSFS LSCFSNFIEH KVSNCGGKLT PSDDCEVTPR
160 170 180 190 200
NFDRSRRRTF NPAALIRCGR STSANALLPN YNMDVTTDTN DLGSSSKSLT
210 220 230 240 250
CCNCKERFGD VWTLLKHSYD IHGLRVCQEA IPESDVSVTS TSSPTSNESM
260 270 280 290 300
HMSSRYNHND TSSKIMHQTI KSESTMMNSF CSERLKEIVT RAGEQDQKPL
310 320 330 340 350
MALRRLMPSE ETEEEQVSAF TSTSLLNSRA SQPQLPTVSS SAGFQTSGSM
360 370 380 390 400
PNVWMQPSML AAMQEYYASI QQMPYPMTNS TAVALLNISN NLQQQQQQQQ
410 420 430 440 450
QLQQQQQNLI AAQPQVATPQ PPAPTPLFQS LNRLSTADES SYTPRPASVA
460 470 480 490 500
IRRRASPEEE LTPPRKSMKI EEEDQLIVVD DGELAEPAAR KPNNIKKERC
510 520 530 540 550
NFCNKVFTNR SNLIVHLRSH TGEKPYKCQL CPYACAQSSK LTRHMRTHGQ
560 570 580 590 600
QGKETYHCYI CRMPFSVHST LEKHMRKCVV STQGRREGGS PPERSIRPTP
610 620 630 640 650
SALAEATSLL ALSAPSISVP PQPQASTVGQ NQSQSHQIVL NWLHALNASN
660 670 680 690
STPTATSKED MIEADEDMEE TEASDLQSHQ PLTSESNQIA TVAN
Length:694
Mass (Da):76,576
Last modified:February 5, 2008 - v1
Checksum:iBD4BE5C0EFFC50DE
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
H2KZR6H2KZR6_CAEEL
Mammalian BCL (B cell lymphoma) gen...
bcl-11 CELE_F13H6.1, F13H6.1
690Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA Translation: CCD69469.1
RefSeqiNP_001122913.1, NM_001129441.2
UniGeneiCel.5120

Genome annotation databases

EnsemblMetazoaiF13H6.1b.1; F13H6.1b.1; WBGene00017430
F13H6.1b.2; F13H6.1b.2; WBGene00017430
GeneIDi179019
KEGGicel:CELE_F13H6.1
UCSCiF13H6.1b c. elegans

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA Translation: CCD69469.1
RefSeqiNP_001122913.1, NM_001129441.2
UniGeneiCel.5120

3D structure databases

ProteinModelPortaliA9D4E4
SMRiA9D4E4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiA9D4E4, 3 interactors
STRINGi6239.F13H6.1b.2

Proteomic databases

EPDiA9D4E4
PaxDbiA9D4E4
PeptideAtlasiA9D4E4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF13H6.1b.1; F13H6.1b.1; WBGene00017430
F13H6.1b.2; F13H6.1b.2; WBGene00017430
GeneIDi179019
KEGGicel:CELE_F13H6.1
UCSCiF13H6.1b c. elegans

Organism-specific databases

CTDi179019
WormBaseiF13H6.1b ; CE41996 ; WBGene00017430 ; bcl-11

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063542
HOGENOMiHOG000021483
InParanoidiA9D4E4
OMAiHGLRICE
OrthoDBiEOG091G02IT
PhylomeDBiA9D4E4

Gene expression databases

BgeeiWBGene00017430 Expressed in 4 organ(s), highest expression level in multi-cellular organism

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA9D4E4_CAEEL
AccessioniPrimary (citable) accession number: A9D4E4
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: November 7, 2018
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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