Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

DNA-(Apurinic or apyrimidinic site) lyase

Gene

MmarC6_0356

Organism
Methanococcus maripaludis (strain C6 / ATCC BAA-1332)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-(Apurinic or apyrimidinic site) lyaseImported (EC:4.2.99.18Imported)
Gene namesi
Ordered Locus Names:MmarC6_0356Imported
OrganismiMethanococcus maripaludis (strain C6 / ATCC BAA-1332)Imported
Taxonomic identifieri444158 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomada groupMethanococciMethanococcalesMethanococcaceaeMethanococcus
Proteomesi
  • UP000000791 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi444158.MmarC6_0356

Structurei

3D structure databases

ProteinModelPortaliA9A768
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini47 – 194ENDO3cInterPro annotationAdd BLAST148
Domaini259 – 355GIY-YIGInterPro annotationAdd BLAST97

Phylogenomic databases

eggNOGiarCOG00459 Archaea
COG0177 LUCA
COG1833 LUCA
HOGENOMiHOG000254262
KOiK10773
OMAiKLPKKYW
OrthoDBiPOG093Z0AWD

Family and domain databases

CDDicd00056 ENDO3c, 1 hit
cd10441 GIY-YIG_COG1833, 1 hit
Gene3Di1.10.1670.10, 1 hit
InterProiView protein in InterPro
IPR011257 DNA_glycosylase
IPR002837 DUF123
IPR004036 Endonuclease-III-like_CS2
IPR000305 GIY-YIG_endonuc
IPR003265 HhH-GPD_domain
IPR000445 HhH_motif
IPR023170 HTH_base_excis_C
PfamiView protein in Pfam
PF01986 DUF123, 1 hit
PF00633 HHH, 1 hit
PF00730 HhH-GPD, 1 hit
SMARTiView protein in SMART
SM00478 ENDO3c, 1 hit
SM00465 GIYc, 1 hit
SUPFAMiSSF48150 SSF48150, 1 hit
PROSITEiView protein in PROSITE
PS01155 ENDONUCLEASE_III_2, 1 hit

Sequencei

Sequence statusi: Complete.

A9A768-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNNTDIPFIK FLNILGENLK KDAVVDKISK NSNENERAFK ILVSTVISAR
60 70 80 90 100
TKDETTAKVS KELFKKVKSP KDLSEISVEE LEKLVHPAGF YKTKAKNLKK
110 120 130 140 150
LGEILLEKYD SKIPNSIEEL IKLPGVGRKT ANLVMTLAFD EYAICVDTHV
160 170 180 190 200
HRITNRWNYV DTEFPENTEM ELRKKLPKDY WKRINNLLVV FGQEICSPIP
210 220 230 240 250
KCDKCFSEIR EICPHYNSLK ELEKIYKDFN FKKTPKTKIP KYKGTYVLRI
260 270 280 290 300
KMNAPRTILV GKREIKFKKG DYFYIGSAMG DSMNLYNRIS RHLSENKKKR
310 320 330 340 350
WHIDYLLEFS NVKEVNVTLG RFECDVSNRF NLVFDSVESF GCSDCKCKSH

LYYIKP
Length:356
Mass (Da):41,501
Last modified:January 15, 2008 - v1
Checksum:i43808AF4B6611208
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000867 Genomic DNA Translation: ABX01177.1

Genome annotation databases

EnsemblBacteriaiABX01177; ABX01177; MmarC6_0356
KEGGimmx:MmarC6_0356

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000867 Genomic DNA Translation: ABX01177.1

3D structure databases

ProteinModelPortaliA9A768
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi444158.MmarC6_0356

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABX01177; ABX01177; MmarC6_0356
KEGGimmx:MmarC6_0356

Phylogenomic databases

eggNOGiarCOG00459 Archaea
COG0177 LUCA
COG1833 LUCA
HOGENOMiHOG000254262
KOiK10773
OMAiKLPKKYW
OrthoDBiPOG093Z0AWD

Family and domain databases

CDDicd00056 ENDO3c, 1 hit
cd10441 GIY-YIG_COG1833, 1 hit
Gene3Di1.10.1670.10, 1 hit
InterProiView protein in InterPro
IPR011257 DNA_glycosylase
IPR002837 DUF123
IPR004036 Endonuclease-III-like_CS2
IPR000305 GIY-YIG_endonuc
IPR003265 HhH-GPD_domain
IPR000445 HhH_motif
IPR023170 HTH_base_excis_C
PfamiView protein in Pfam
PF01986 DUF123, 1 hit
PF00633 HHH, 1 hit
PF00730 HhH-GPD, 1 hit
SMARTiView protein in SMART
SM00478 ENDO3c, 1 hit
SM00465 GIYc, 1 hit
SUPFAMiSSF48150 SSF48150, 1 hit
PROSITEiView protein in PROSITE
PS01155 ENDONUCLEASE_III_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA9A768_METM6
AccessioniPrimary (citable) accession number: A9A768
Entry historyiIntegrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: October 10, 2018
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again