UniProtKB - A8Z333 (RS13_STAAT)
Protein
30S ribosomal protein S13
Gene
rpsM
Organism
Staphylococcus aureus (strain USA300 / TCH1516)
Status
Functioni
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.UniRule annotation
GO - Molecular functioni
- rRNA binding Source: UniProtKB-UniRule
- structural constituent of ribosome Source: InterPro
- tRNA binding Source: UniProtKB-UniRule
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 30S ribosomal protein S13UniRule annotation |
Gene namesi | Name:rpsMUniRule annotation Ordered Locus Names:USA300HOU_2217 |
Organismi | Staphylococcus aureus (strain USA300 / TCH1516) |
Taxonomic identifieri | 451516 [NCBI] |
Taxonomic lineagei | Bacteria › Firmicutes › Bacilli › Bacillales › Staphylococcaceae › Staphylococcus › |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_1000086265 | 1 – 121 | 30S ribosomal protein S13Add BLAST | 121 |
Interactioni
Subunit structurei
Part of the 30S ribosomal subunit.
Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.
UniRule annotationFamily & Domainsi
Sequence similaritiesi
Belongs to the universal ribosomal protein uS13 family.UniRule annotation
Phylogenomic databases
HOGENOMi | CLU_103849_1_1_9 |
OMAi | QTNARTR |
Family and domain databases
Gene3Di | 4.10.910.10, 1 hit |
HAMAPi | MF_01315, Ribosomal_S13_S18, 1 hit |
InterProi | View protein in InterPro IPR027437, 30s_Rbsml_prot_S13_C IPR001892, Ribosomal_S13 IPR010979, Ribosomal_S13-like_H2TH IPR019980, Ribosomal_S13_bac-type IPR018269, Ribosomal_S13_CS |
PANTHERi | PTHR10871:SF1, PTHR10871:SF1, 1 hit |
Pfami | View protein in Pfam PF00416, Ribosomal_S13, 1 hit |
PIRSFi | PIRSF002134, Ribosomal_S13, 1 hit |
SUPFAMi | SSF46946, SSF46946, 1 hit |
TIGRFAMsi | TIGR03631, uS13_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00646, RIBOSOMAL_S13_1, 1 hit PS50159, RIBOSOMAL_S13_2, 1 hit |
i Sequence
Sequence statusi: Complete.
A8Z333-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MARIAGVDIP REKRVVISLT YIYGIGTSTA QKILEEANVS ADTRVKDLTD
60 70 80 90 100
DELGRIREVV DGYKVEGDLR RETNLNIKRL MEISSYRGIR HRRGLPVRGQ
110 120
KTKNNARTRK GPVKTVANKK K
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP000730 Genomic DNA Translation: ABX30210.1 |
RefSeqi | WP_000090796.1, NC_010079.1 |
Genome annotation databases
GeneIDi | 58068077 59701043 |
KEGGi | sax:USA300HOU_2217 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP000730 Genomic DNA Translation: ABX30210.1 |
RefSeqi | WP_000090796.1, NC_010079.1 |
3D structure databases
SMRi | A8Z333 |
ModBasei | Search... |
Genome annotation databases
GeneIDi | 58068077 59701043 |
KEGGi | sax:USA300HOU_2217 |
Phylogenomic databases
HOGENOMi | CLU_103849_1_1_9 |
OMAi | QTNARTR |
Family and domain databases
Gene3Di | 4.10.910.10, 1 hit |
HAMAPi | MF_01315, Ribosomal_S13_S18, 1 hit |
InterProi | View protein in InterPro IPR027437, 30s_Rbsml_prot_S13_C IPR001892, Ribosomal_S13 IPR010979, Ribosomal_S13-like_H2TH IPR019980, Ribosomal_S13_bac-type IPR018269, Ribosomal_S13_CS |
PANTHERi | PTHR10871:SF1, PTHR10871:SF1, 1 hit |
Pfami | View protein in Pfam PF00416, Ribosomal_S13, 1 hit |
PIRSFi | PIRSF002134, Ribosomal_S13, 1 hit |
SUPFAMi | SSF46946, SSF46946, 1 hit |
TIGRFAMsi | TIGR03631, uS13_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00646, RIBOSOMAL_S13_1, 1 hit PS50159, RIBOSOMAL_S13_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RS13_STAAT | |
Accessioni | A8Z333Primary (citable) accession number: A8Z333 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | May 20, 2008 |
Last sequence update: | January 15, 2008 | |
Last modified: | April 7, 2021 | |
This is version 74 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Documents
- Ribosomal proteins
Ribosomal proteins families and list of entries - SIMILARITY comments
Index of protein domains and families