UniProtKB - A8Y5F6 (A8Y5F6_MOUSE)
Protein
Submitted name:
Podoplanin
Gene
Pdpn
Organism
Mus musculus (Mouse)
Status
Names & Taxonomyi
Protein namesi | Submitted name: PodoplaninImported |
Gene namesi | Name:PdpnImported |
Organismi | Mus musculus (Mouse)Imported |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:103098, Pdpn |
Subcellular locationi
Other locations
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 125 – 149 | HelicalSequence analysisAdd BLAST | 25 |
Keywords - Cellular componenti
MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 22 | Sequence analysisAdd BLAST | 22 | |
ChainiPRO_5002734313 | 23 – 159 | Sequence analysisAdd BLAST | 137 |
Proteomic databases
MaxQBi | A8Y5F6 |
PeptideAtlasi | A8Y5F6 |
Expressioni
Gene expression databases
Bgeei | ENSMUSG00000028583, Expressed in camera-type eye and 300 other tissues |
ExpressionAtlasi | A8Y5F6, baseline and differential |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 49 – 117 | DisorderedSequence analysisAdd BLAST | 69 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 87 – 102 | PolyampholyteSequence analysisAdd BLAST | 16 |
Keywords - Domaini
SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisPhylogenomic databases
GeneTreei | ENSGT00390000000013 |
HOGENOMi | CLU_102220_0_0_1 |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
A8Y5F6-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MWTVPVLFWV LGSVWFWDSA QGGTIGVNED DIVTPGTGDG MVPPGIEDKI
60 70 80 90 100
TTTGATGGLN ESTGKAPLVP TQRERGTKPP LEELSTSATS DHDHREHEST
110 120 130 140 150
TTVKVVTSHS VDKKTSHPNR DGLPVVTLVG IIVGVLLAIG FVGGIFIVVM
KKISGRFSP
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketQ62011 | PDPN_MOUSE | Podoplanin | Pdpn Gp38, Ots8 | 172 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL611982 Genomic DNA No translation available. |
RefSeqi | NP_001277751.1, NM_001290822.1 |
Genome annotation databases
Ensembli | ENSMUST00000119654; ENSMUSP00000113776; ENSMUSG00000028583 |
GeneIDi | 14726 |
UCSCi | uc056zyi.1, mouse |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL611982 Genomic DNA No translation available. |
RefSeqi | NP_001277751.1, NM_001290822.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Proteomic databases
MaxQBi | A8Y5F6 |
PeptideAtlasi | A8Y5F6 |
Protocols and materials databases
Antibodypediai | 764, 1251 antibodies |
Genome annotation databases
Ensembli | ENSMUST00000119654; ENSMUSP00000113776; ENSMUSG00000028583 |
GeneIDi | 14726 |
UCSCi | uc056zyi.1, mouse |
Organism-specific databases
CTDi | 10630 |
MGIi | MGI:103098, Pdpn |
Phylogenomic databases
GeneTreei | ENSGT00390000000013 |
HOGENOMi | CLU_102220_0_0_1 |
Miscellaneous databases
BioGRID-ORCSi | 14726, 0 hits in 18 CRISPR screens |
ChiTaRSi | Pdpn, mouse |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000028583, Expressed in camera-type eye and 300 other tissues |
ExpressionAtlasi | A8Y5F6, baseline and differential |
Family and domain databases
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A8Y5F6_MOUSE | |
Accessioni | A8Y5F6Primary (citable) accession number: A8Y5F6 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | January 15, 2008 |
Last sequence update: | January 15, 2008 | |
Last modified: | December 2, 2020 | |
This is version 85 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |