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Protein
Submitted name:

Protein CBG20269

Gene

tyms-1

Organism
Caenorhabditis briggsae
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei197PROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein CBG20269Imported
Gene namesi
Name:tyms-1Imported
ORF Names:CBG20269Imported, CBG_20269Imported
OrganismiCaenorhabditis briggsaeImported
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008549 Componenti: Chromosome I

Organism-specific databases

WormBaseiCBG20269 ; CBP19819 ; WBGene00039295 ; Cbr-tyms-1

Interactioni

Protein-protein interaction databases

STRINGi6238.CBG20269

Structurei

3D structure databases

ProteinModelPortaliA8XXD3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 315Thymidylat_syntInterPro annotationAdd BLAST283

Phylogenomic databases

eggNOGiKOG0673 Eukaryota
COG0207 LUCA
HOGENOMiHOG000257899
InParanoidiA8XXD3
KOiK00560
OMAiKQYLDLC
OrthoDBiEOG091G0CV0

Family and domain databases

CDDicd00351 TS_Pyrimidine_HMase, 1 hit
Gene3Di3.30.572.10, 1 hit
HAMAPiMF_00008 Thymidy_synth_bact, 1 hit
InterProiView protein in InterPro
IPR023451 Thymidate_synth/dCMP_Mease
IPR036926 Thymidate_synth/dCMP_Mease_sf
IPR000398 Thymidylate_synthase
IPR020940 Thymidylate_synthase_AS
PfamiView protein in Pfam
PF00303 Thymidylat_synt, 1 hit
PRINTSiPR00108 THYMDSNTHASE
SUPFAMiSSF55831 SSF55831, 1 hit
TIGRFAMsiTIGR03284 thym_sym, 1 hit
PROSITEiView protein in PROSITE
PS00091 THYMIDYLATE_SYNTHASE, 1 hit

Sequencei

Sequence statusi: Complete.

A8XXD3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKENIVPET IELPSQEKSG KEIAQHVNQD EFKYLKQVEQ ILQEGSRRDD
60 70 80 90 100
RTGTGTISIF GMQSKYSLRN DTIPLLTTKR VYWKGVLEEL LWFISGSTDG
110 120 130 140 150
KLLMAKNVKI WEKNGDRAFL DNLGFTSREE GDLGPVYGFQ WRHFGAKYVD
160 170 180 190 200
CHTDYTGQGI DQLAEVIRQI KEEPDSRRII LSAWNPSELG QMVLPPCHTM
210 220 230 240 250
CQFYVDNGEL SCQLYQRSGD MGLGVPFNLA SYGLLTHMIA KVCGLKAGTL
260 270 280 290 300
VHTLGDAHVY SNHVDALKTQ MEREPYAFPK IRFTRDVSSI DDFTSDMIVL
310
EDYKCHGKIV MDMAV
Length:315
Mass (Da):35,789
Last modified:January 15, 2008 - v1
Checksum:iE78B091B54F20BEC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601190 Genomic DNA Translation: CAP37322.1
RefSeqiXP_002640365.1, XM_002640319.1

Genome annotation databases

EnsemblMetazoaiCBG20269; CBG20269; WBGene00039295
GeneIDi8582360
KEGGicbr:CBG20269

Similar proteinsi

Entry informationi

Entry nameiA8XXD3_CAEBR
AccessioniPrimary (citable) accession number: A8XXD3
Entry historyiIntegrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: October 25, 2017
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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