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Protein
Submitted name:

Protein CBG19693

Gene

rpn-13

Organism
Caenorhabditis briggsae
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein CBG19693Imported
Gene namesi
Name:rpn-13Imported
ORF Names:CBG19693Imported, CBG_19693Imported
OrganismiCaenorhabditis briggsaeImported
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008549 Componenti: Chromosome III

Organism-specific databases

WormBaseiCBG19693 ; CBP46154 ; WBGene00038868 ; Cbr-rpn-13

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi6238.CBG19693

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini228 – 333RPN13_CInterPro annotationAdd BLAST106

Phylogenomic databases

eggNOGiKOG3037 Eukaryota
ENOG410XSJJ LUCA
HOGENOMiHOG000005947
InParanoidiA8XW78
OMAiHCRRINE
OrthoDBiEOG091G0FEO

Family and domain databases

Gene3Di2.30.29.70, 1 hit
3.40.190.140, 1 hit
InterProiView protein in InterPro
IPR006773 Rpn13/ADRM1
IPR038633 Rpn13/ADRM1_sf
IPR032368 RPN13_C
IPR038108 RPN13_C_sf
PANTHERiPTHR12225 PTHR12225, 1 hit
PfamiView protein in Pfam
PF04683 Proteasom_Rpn13, 1 hit
PF16550 RPN13_C, 1 hit

Sequencei

Sequence statusi: Complete.

A8XW78-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAMFSNARS TTSSSGHIVE FKAGRSRLDA GSADTMRKVV AEPTKGLVYI
60 70 80 90 100
KQSNDMLIHF CWKNRETGAL VDDLIIFPDD AEFKAVTGCP DGKVYMLKFR
110 120 130 140 150
SSGEMKLFWL QDSTPDVDKD LVRKVNDALN KPPTSRPSAS RSSGSTTNAD
160 170 180 190 200
RPSAGGSSIM SGNDFNAPLG GLDQGQLMSL IQSLQGNSSD SLPLTAGSGA
210 220 230 240 250
APSSEADCEP TAGEGSSNPL SLDNPAIQNI FKNLGQQQKR QGGVSASLGE
260 270 280 290 300
ALANSTVADV AKNHADELAQ HLPASDDPAK ELADTVRTPQ FRQAADTLGH
310 320 330 340 350
ALQTGQLGPV LSQFGMNDET IAAATQGDLR KFATNLTKAE GGEQDKSAEE
360 370
NPEDDVAREP EAKRNRPDNE DMDVD
Length:375
Mass (Da):39,771
Last modified:December 16, 2008 - v2
Checksum:iCBB89BE8D32AECEC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE600934 Genomic DNA Translation: CAP36897.2

Similar proteinsi

Entry informationi

Entry nameiA8XW78_CAEBR
AccessioniPrimary (citable) accession number: A8XW78
Entry historyiIntegrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: December 16, 2008
Last modified: March 28, 2018
This is version 53 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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