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Protein
Submitted name:

Protein CBR-COL-124

Gene

col-124

Organism
Caenorhabditis briggsae
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Protein CBR-COL-124Imported
Gene namesi
Name:col-124Imported
Synonyms:Cbr-col-124Imported
ORF Names:CBG03393Imported, CBG_03393Imported
OrganismiCaenorhabditis briggsaeImported
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008549 Componenti: Chromosome IV

Organism-specific databases

WormBaseiCBG03393 ; CBP06508 ; WBGene00026263 ; Cbr-col-124

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 36HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi6238.CBG03393

Structurei

3D structure databases

ProteinModelPortaliA8WUY3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 64Col_cuticle_NInterPro annotationAdd BLAST53

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
HOGENOMiHOG000085656
InParanoidiA8WUY3
OMAiVFFEDGH
OrthoDBiEOG091G0VSH

Family and domain databases

InterProiView protein in InterPro
IPR002486 Col_cuticle_N
PfamiView protein in Pfam
PF01484 Col_cuticle_N, 1 hit
SMARTiView protein in SMART
SM01088 Col_cuticle_N, 1 hit

Sequencei

Sequence statusi: Complete.

A8WUY3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDIDSRIKAY RFVGYAALTF STIAVLSVCV TLPIMYNYIH HTRKVMHNDI
60 70 80 90 100
VECKSEAERL FSQVNSIPDL VMAHNRTARQ VGEGNGQCEG CCLPGAQGPP
110 120 130 140 150
GTPGRVGRPG KPGAPGLNGN PGRPPKEPCE PLTPPPCKPC PEGPPGPAGP
160 170 180 190 200
PGPDGNKGPL GPPGPPGPEG SNGEPGNKGP AGPPGPGGKP GPAGPPGENG
210 220 230 240 250
NNGEPQPGAP GEPGQPGQPG PRGPSGEPGK DGTPGGPGEK GASGEPGAPG
260 270 280 290
RDGQPGHPGQ PGKDGRQGEK GVCPKYCALD GGVFFEDGHR R
Length:291
Mass (Da):29,142
Last modified:January 15, 2008 - v1
Checksum:i409E723FD1647BB3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601244 Genomic DNA Translation: CAP24294.1
RefSeqiXP_002633710.1, XM_002633664.1

Genome annotation databases

EnsemblMetazoaiCBG03393; CBG03393; WBGene00026263
GeneIDi8575706
KEGGicbr:CBG03393

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601244 Genomic DNA Translation: CAP24294.1
RefSeqiXP_002633710.1, XM_002633664.1

3D structure databases

ProteinModelPortaliA8WUY3
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6238.CBG03393

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiCBG03393; CBG03393; WBGene00026263
GeneIDi8575706
KEGGicbr:CBG03393

Organism-specific databases

CTDi8575706
WormBaseiCBG03393 ; CBP06508 ; WBGene00026263 ; Cbr-col-124

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
HOGENOMiHOG000085656
InParanoidiA8WUY3
OMAiVFFEDGH
OrthoDBiEOG091G0VSH

Family and domain databases

InterProiView protein in InterPro
IPR002486 Col_cuticle_N
PfamiView protein in Pfam
PF01484 Col_cuticle_N, 1 hit
SMARTiView protein in SMART
SM01088 Col_cuticle_N, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA8WUY3_CAEBR
AccessioniPrimary (citable) accession number: A8WUY3
Entry historyiIntegrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: November 7, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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