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Entry version 46 (03 Jul 2019)
Sequence version 1 (15 Jan 2008)
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Protein
Submitted name:

Uncharacterized protein

Gene

RICGR_0525

Organism
Rickettsiella grylli
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:RICGR_0525Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRickettsiella grylliImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri59196 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeRickettsiella
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000054075 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
59196.RICGR_0525

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini43 – 865ANK_REP_REGIONInterPro annotationAdd BLAST823
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati68 – 100ANKPROSITE-ProRule annotationAdd BLAST33
Repeati102 – 134ANKPROSITE-ProRule annotationAdd BLAST33
Repeati135 – 167ANKPROSITE-ProRule annotationAdd BLAST33
Repeati167 – 199ANKPROSITE-ProRule annotationAdd BLAST33
Repeati200 – 232ANKPROSITE-ProRule annotationAdd BLAST33
Repeati266 – 298ANKPROSITE-ProRule annotationAdd BLAST33
Repeati299 – 331ANKPROSITE-ProRule annotationAdd BLAST33
Repeati332 – 364ANKPROSITE-ProRule annotationAdd BLAST33
Repeati433 – 465ANKPROSITE-ProRule annotationAdd BLAST33
Repeati466 – 498ANKPROSITE-ProRule annotationAdd BLAST33
Repeati499 – 531ANKPROSITE-ProRule annotationAdd BLAST33
Repeati532 – 564ANKPROSITE-ProRule annotationAdd BLAST33
Repeati565 – 597ANKPROSITE-ProRule annotationAdd BLAST33
Repeati598 – 630ANKPROSITE-ProRule annotationAdd BLAST33
Repeati631 – 663ANKPROSITE-ProRule annotationAdd BLAST33
Repeati723 – 755ANKPROSITE-ProRule annotationAdd BLAST33
Repeati756 – 788ANKPROSITE-ProRule annotationAdd BLAST33
Repeati823 – 859ANKPROSITE-ProRule annotationAdd BLAST37

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

ANK repeatPROSITE-ProRule annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4105JXB Bacteria
COG0666 LUCA

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00204 ANK, 6 hits

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.40.20, 5 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF12796 Ank_2, 6 hits

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR01415 ANKYRIN

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00248 ANK, 25 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48403 SSF48403, 3 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 18 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A8PLT4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLLKNKFFIR SNQTHFIYFR RKSRLCHSQL VNRNLMINNI FRAIRHGCLD
60 70 80 90 100
AVKFFVEAGV SVNVRNFRGM TPLYLAVYYG YSPIVKFLIT KGSYLEIKER
110 120 130 140 150
MMGNTPLHIA VQYGHVDIVD MLFERGVDLN IFNSQGDTPL NYAVKYGHLK
160 170 180 190 200
LVKYLVKNGA YLDEFYTGLT PLHYAAQKNN LAVAEYLINK GMDVNKMTVT
210 220 230 240 250
GETALYYAIQ YGHLNMVRYL VEKGAYLDSL DKQHNTPLFY ATLFGYTDIV
260 270 280 290 300
SFLLSKKVKL DLKMPSHLSP LQIATLKGDL VLVKCLVENG ANLAIKDANN
310 320 330 340 350
STLLHNAIHD GYSDLVNFFL EKKIDLETKD NDGNTALHYA VLMDDLESVK
360 370 380 390 400
SLINAGADLT AVNIKSYTPL QISIVDNNIN LMEFLVKETA IKFTLKCEAL
410 420 430 440 450
YEQILHFSAA HGEIGIIDHL AKKGIRLELS DQFGRTPLHW ASQNGYFDMV
460 470 480 490 500
NYLTKKNVNL EIKDNYGDTP LHLATRNNFL RIVVFLIDHG VHVETKNKMG
510 520 530 540 550
VTPLYVASRN GHLDMVKYLI GKNATIEANN DSGSTPLHEA ARNGHLDIVK
560 570 580 590 600
YLIGKNATIE ANNDSGSTPL HEAARNGHLD IVKYLIKKNA TSEISDNLGN
610 620 630 640 650
TPLHLSVSRN NEDVVRYLIE QDADINAQDN HGNTALHVAA FNDYIELINY
660 670 680 690 700
LMEQGADTGI ENNVGKTFLN SILDNGSVAT IRYFFKGKKL NLSLLEAIKN
710 720 730 740 750
YHLNVITFLV EEENRDLKCK DRYGRTPLHV AIWFGYTELV IYLVERGADV
760 770 780 790 800
NSTDQLGNTP LHTAGITNYV NSIQILLTHG ADIEAKNNEG NTPLQVAILS
810 820 830 840 850
HAMDVVHYLV EHSMVNLNTQ GSEGNTALHF AMIISDENLS LKMVTYLLEQ
860 870 880 890 900
HANSHIKNNK GNTPLDQLSP THRHYEKIKH LITEKKQKDN VAFSMSAHNT
910 920 930 940 950
RFEKHLKPRI KKNQPIRMNL GLETQFISNT FQEKANLSEC SNLIGFLNPA
960 970 980 990 1000
TCEHGYFNTT REFIPHNLIS IPSVLPLIDL LIRKKKGTTL NFFQKDDSIS
1010 1020 1030 1040 1050
DLDAQAYALN IVTEFEAHLK KIEVKVDFDS IALQTELLKK IKSGQFCDIS
1060
KVLSSTLENI KRTALQPN
Length:1,068
Mass (Da):120,461
Last modified:January 15, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i884A55C04751FE2F
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AAQJ02000001 Genomic DNA Translation: EDP46133.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
EDP46133; EDP46133; RICGR_0525

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAQJ02000001 Genomic DNA Translation: EDP46133.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi59196.RICGR_0525

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEDP46133; EDP46133; RICGR_0525

Phylogenomic databases

eggNOGiENOG4105JXB Bacteria
COG0666 LUCA

Family and domain databases

CDDicd00204 ANK, 6 hits
Gene3Di1.25.40.20, 5 hits
InterProiView protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
PfamiView protein in Pfam
PF12796 Ank_2, 6 hits
PRINTSiPR01415 ANKYRIN
SMARTiView protein in SMART
SM00248 ANK, 25 hits
SUPFAMiSSF48403 SSF48403, 3 hits
PROSITEiView protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 18 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA8PLT4_9COXI
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A8PLT4
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: July 3, 2019
This is version 46 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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