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Protein
Submitted name:

AT4G17730 protein

Gene

SYP23

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
AT4G17730 proteinImported
Submitted name:
Syntaxin of plants 23Imported
Gene namesi
Name:SYP23Imported
Synonyms:ATSYP23Imported, syntaxin of plants 23Imported
Ordered Locus Names:At4g17730Imported
ORF Names:Dl4901WImported, FCAALL.117Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G17730
TAIRilocus:2129406 AT4G17730

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

ExpressionAtlasiA8MS65 differential

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

SMRiA8MS65
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini184 – 246T-SNARE coiled-coil homologyInterPro annotationAdd BLAST63

Sequence similaritiesi

Belongs to the syntaxin family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0811 Eukaryota
COG5325 LUCA
HOGENOMiHOG000188453
OMAiEREPINN
OrthoDBiEOG09360LBI

Family and domain databases

InterProiView protein in InterPro
IPR010989 SNARE
IPR006012 Syntaxin/epimorphin_CS
IPR006011 Syntaxin_N
IPR000727 T_SNARE_dom
PfamiView protein in Pfam
PF00804 Syntaxin, 1 hit
PF14523 Syntaxin_2, 1 hit
SMARTiView protein in SMART
SM00503 SynN, 1 hit
SM00397 t_SNARE, 1 hit
SUPFAMiSSF47661 SSF47661, 1 hit
PROSITEiView protein in PROSITE
PS00914 SYNTAXIN, 1 hit
PS50192 T_SNARE, 1 hit

Sequencei

Sequence statusi: Complete.

A8MS65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFQDLEAGR GRSLASSRNI NGGGSRQDTT QDVASGIFQI NTSVSTFHRL
60 70 80 90 100
VNTLGTPKDT PELREKLHKT RLYIGQLVKD TSAKLKEASE TDHQRGVNQK
110 120 130 140 150
KKIVDAKLAK DFQAVLKEFQ KAQRLAAERE TVYAPLVHKP SLPSSYTSSE
160 170 180 190 200
IDVNGDKHPE QRALLVESKR QELVLLDNEI AFNEAVIEER EQGIQEIQQQ
210 220 230 240 250
IGEVHEIFKD LAVLVHDQGN MIDDIGTHID NSYAATAQGK SHLVRHQRHK
260
DQILLCLISP SS
Length:262
Mass (Da):29,292
Last modified:December 4, 2007 - v1
Checksum:i9A2890BB18D24783
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002687 Genomic DNA Translation: AEE83942.1
AK316791 mRNA Translation: BAH19509.1
RefSeqiNP_001078403.1, NM_001084934.1
UniGeneiAt.4498
At.54

Genome annotation databases

EnsemblPlantsiAT4G17730.2; AT4G17730.2; AT4G17730
GeneIDi827494
GrameneiAT4G17730.2; AT4G17730.2; AT4G17730

Similar proteinsi

Entry informationi

Entry nameiA8MS65_ARATH
AccessioniPrimary (citable) accession number: A8MS65
Entry historyiIntegrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: May 23, 2018
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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