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Protein
Submitted name:

TRAF-like superfamily protein

Gene

At1g04300

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
TRAF-like superfamily proteinImported
Gene namesi
Ordered Locus Names:At1g04300Imported
ORF Names:F19P19.26Imported, F19P19_26Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G04300

PTM / Processingi

Proteomic databases

PRIDEiA8MR11

Expressioni

Gene expression databases

ExpressionAtlasiA8MR11 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliA8MR11
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini67 – 190MATHInterPro annotationAdd BLAST124

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili438 – 458Sequence analysisAdd BLAST21
Coiled coili479 – 499Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IE0P Eukaryota
ENOG410ZKXJ LUCA
HOGENOMiHOG000238326
PhylomeDBiA8MR11

Family and domain databases

CDDicd00121 MATH, 1 hit
Gene3Di2.60.210.10, 1 hit
InterProiView protein in InterPro
IPR002083 MATH/TRAF_dom
IPR008974 TRAF-like
PfamiView protein in Pfam
PF00917 MATH, 1 hit
SMARTiView protein in SMART
SM00061 MATH, 1 hit
SUPFAMiSSF49599 SSF49599, 1 hit
PROSITEiView protein in PROSITE
PS50144 MATH, 1 hit

Sequencei

Sequence statusi: Complete.

A8MR11-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEAVDEDSG VGRSLEESSN GQHSQAGEAL SEWRSSGQVE NGTPSTSPSY
60 70 80 90 100
WDIDDDDDYG LKPSELYGQY TWKIPKFSEI TKREHRSNVF EAGGYKWYIL
110 120 130 140 150
IYPQGCDVCN HLSLFLCVAN YDKLLPGWSQ FAQFTISVLS QDLKKSKFSD
160 170 180 190 200
TLHRFWKKEH DWGWKKFMEL PKLKDGFIDE SGCLTIEAKV QVIRERVDRP
210 220 230 240 250
FRCLDCGYRR ELVRVYFQNV EQICRRFVEE KRSKLGRLIE DKARWTSFGV
260 270 280 290 300
FWLGMDQNSR RRMCREKVDV ILKGVVKHFF VEKEVSSTLV MDSLYSGLKA
310 320 330 340 350
LEGQTKNMKA RSRLLDAKQL PAPIVSVDKD MFVLVDDVLL LLERAALEPL
360 370 380 390 400
PPKDEKGRQN RTKDGNDGEE VNKEADERDE RRLTELGRRT VEIFILSHIF
410 420 430 440 450
STKIEVAHQE AIALKRQEEL IREEEEAWLA ETEQRAKRGA AEREKKSKKK
460 470 480 490 500
QAKQKRNKNK GKDKRKEEKV SFATHAKDLE ENQNQNQNDE EEKDSVTEKA
510 520 530 540 550
QSSAEKPDTL GDVSDISDSV DGSADILQPD LEDRDSSSVL WDTDALEIHP
560 570 580 590 600
PSSEGSSRGR GISISTPNGI TEGKSHSTMD DSSSTCSNDS IRSGVTNGSY
610 620 630 640 650
QGNSLNFRNQ KSPNKGKNQQ VKAMTDAHSL ASETDDQPST LGTDPKGQNY
660 670 680 690 700
SSEASNVGES DWVVVSHIQE PEGSRNRIPV GRERKTVQSI VNSVDMDRPK
710 720 730 740 750
EKSTAVLSSP RNVAKNPSPL TQTKPEKKSI STADGIPNRK VLATGPPSSS
760 770 780 790 800
QVVLPSDIQS QTVGLRADMQ KLSAPKQPPA TTISRPSSAP IIPAMRPSPI
810 820 830 840 850
TVSSSVQTTT SLPRSVSSAG RLGPDPSLHN QQTYTPQSYK NAIVGNSLGS
860 870 880 890 900
SSSSFNHHPS SHGVVPTTLP SSSYSQAPTS SYQSSFPYSQ DGLLWTGRSP
910 920 930 940 950
SSVNMGMYNN TYSPAVTSNR SLNHMDVQIA QQQAQSMMTD EFPHLDIIND
960 970 980 990 1000
LLEDEQCSNM VYNGSIFNPQ PQVFNGQYSS YHGELLSGGR TRSFGEEGLH
1010 1020 1030 1040 1050
YMARGPYGTD GMMPRQWQMT NMDLSLPAMR SNGMEDGTSS AANYHHSYFG
1060 1070
LDASNPSFTS GINGYTEFRP SNGH
Length:1,074
Mass (Da):119,655
Last modified:December 4, 2007 - v1
Checksum:i0328A67F15F1F352
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002684 Genomic DNA Translation: AEE27680.1
RefSeqiNP_171926.3, NM_100311.4
UniGeneiAt.24558

Genome annotation databases

EnsemblPlantsiAT1G04300.1; AT1G04300.1; AT1G04300
GeneIDi839551
GrameneiAT1G04300.1; AT1G04300.1; AT1G04300

Similar proteinsi

Entry informationi

Entry nameiA8MR11_ARATH
AccessioniPrimary (citable) accession number: A8MR11
Entry historyiIntegrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: July 18, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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