UniProtKB - A8ITW8 (A8ITW8_CHLRE)
Protein
Submitted name:
Dicer-like protein
Gene
DCL3
Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Functioni
GO - Molecular functioni
- double-stranded RNA binding Source: GO_Central
- ribonuclease III activity Source: GO_Central
GO - Biological processi
- pre-miRNA processing Source: GO_Central
- primary miRNA processing Source: GO_Central
- production of siRNA involved in RNA interference Source: GO_Central
- RNA processing Source: GO_Central
Names & Taxonomyi
Protein namesi | Submitted name: Dicer-like proteinImported |
Gene namesi | Name:DCL3Imported ORF Names:CHLREDRAFT_12013Imported |
Organismi | Chlamydomonas reinhardtii (Chlamydomonas smithii) |
Taxonomic identifieri | 3055 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Chlorophyta › Chlorophyceae › Chlamydomonadales › Chlamydomonadaceae › Chlamydomonas |
Subcellular locationi
Nucleus
- nucleus Source: GO_Central
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 24 – 264 | Helicase ATP-bindingInterPro annotationAdd BLAST | 241 | |
Domaini | 949 – 1114 | Helicase C-terminalInterPro annotationAdd BLAST | 166 | |
Domaini | 2566 – 2637 | RNase IIIInterPro annotationAdd BLAST | 72 | |
Domaini | 3277 – 3513 | RNase IIIInterPro annotationAdd BLAST | 237 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 1525 – 1555 | Sequence analysisAdd BLAST | 31 | |
Coiled coili | 2297 – 2320 | Sequence analysisAdd BLAST | 24 |
Keywords - Domaini
Coiled coilSequence analysisPhylogenomic databases
InParanoidi | A8ITW8 |
OrthoDBi | 1337630at2759 |
Family and domain databases
CDDi | cd00079 HELICc, 1 hit cd00593 RIBOc, 2 hits |
Gene3Di | 1.10.1520.10, 3 hits |
InterProi | View protein in InterPro IPR014001 Helicase_ATP-bd IPR001650 Helicase_C IPR027417 P-loop_NTPase IPR000999 RNase_III_dom IPR036389 RNase_III_sf |
Pfami | View protein in Pfam PF00271 Helicase_C, 1 hit PF00636 Ribonuclease_3, 2 hits |
SMARTi | View protein in SMART SM00487 DEXDc, 1 hit SM00535 RIBOc, 2 hits |
SUPFAMi | SSF52540 SSF52540, 2 hits SSF69065 SSF69065, 2 hits |
PROSITEi | View protein in PROSITE PS51192 HELICASE_ATP_BIND_1, 1 hit PS51194 HELICASE_CTER, 1 hit PS00517 RNASE_3_1, 2 hits PS50142 RNASE_3_2, 2 hits |
i Sequence
Sequence statusi: Complete.
A8ITW8-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MVRVSPGAGG AVPLPPLREY QRCVLEVAAA HDCIVFLETG MGKTRVAVEL
60 70 80 90 100
VAALLPRMRW RRQLAVFLAP SVPLVRQQAE VLARVADTGF EAVAAAAAEA
110 120 130 140 150
ASATAAEAAA AAGAAAADGT PARRKARQAA ATATPTKGHQ SAAQGAGGSA
160 170 180 190 200
VAVADSLAAG SQPQNLSLSL PPPPQQQQQQ LQQQQAASSR PLLRVEWLGG
210 220 230 240 250
SSAHEAWGPA GWAALRRRAD VLVCTPAVLL GALVHASILV CDVGLLVLDE
260 270 280 290 300
AHHCREQHPY AVLLREFIAR PPVPELTELT EGKEEAEGKE GKEEEEGKEG
310 320 330 340 350
KEEEEVVAGA GGAAEGAAEG VVVEEAAMVE RAAEVEGAAE VEGAAAGRAE
360 370 380 390 400
AEAGPEAGPE TRGPEAELEA RRAAFGVDGQ QEGNGGGSRG GGGTSDVAMR
410 420 430 440 450
DTHTNTLDPE RGATSAREVN VEAEVPVPVP VPAAAPRAAR LARGGAGGGG
460 470 480 490 500
GGGCYDRRRL RPRLLGLTAS PLHPLLLQEC MLGARLVAPP PGSLREWAAH
510 520 530 540 550
CSRPKAQILW VGDDKPLPPP PALPPAAAAA IAAATPPMPP PAAPQPVQAA
560 570 580 590 600
GAEEAMETAE DGRERGGVEA THDPEPLATS DDDLSFIPVP PLPRAFSFSS
610 620 630 640 650
TSTTDTADSA TDMDTATAAD AAATAATSTD AATAAAAADG GGGGSYSCPL
660 670 680 690 700
RAAIGYCRRL LLLAERVMSQ RERLLRLHAL GEVDLKRLGL EGSELLAAGG
710 720 730 740 750
RHGGADMGGN ALRDLRLIRS QIMDSTDLGP PPGPRDAERL RADWAELQLA
760 770 780 790 800
LDSCGLPKPG DSSSNGSGGS SSKCTGPDAG ATAAAAGAAA VAPAATATAA
810 820 830 840 850
AQRWARRAGV GERVAAAVLA AAMEGCLALA APPAEEAAAI AAGFGDALLR
860 870 880 890 900
RGGCRPAGRR VLARWAERLL RSVPPALLQF HVLGLLPPAP HEAAAVAAAH
910 920 930 940 950
DSWRRRGTPL VAHRVVWLLR QLHRRALEAA AATATAATVT AGAATAAPAA
960 970 980 990 1000
EAAATAAAPV VLTAQQRRQQ RAAAARAAAT ARSAAVLLRT GVFVGTGGAA
1010 1020 1030 1040 1050
VASAPAGGKA SGQKRQDEVR TAFASGRLNV LLSTSIGAEG LDFSSCALVA
1060 1070 1080 1090 1100
ALDLPRHVTP FLQSGGRARA PGSEHWLLVR TPEELELAQR LMAAEEALQA
1110 1120 1130 1140 1150
KAAHVSAYNL RELGFRIQTP AGNPAAVAAG GAGTGQDPNP DPDDMDADQA
1160 1170 1180 1190 1200
AAARSPSDTP EPLTATAALE AATASGPVAA AAAAAAAAAA AAVVGPGAGT
1210 1220 1230 1240 1250
AAGVDVDVEL ACLAAVALLW RRGDLDDHLC PRHSRKALTQ AAHQAAFGEF
1260 1270 1280 1290 1300
QHSIASAVLP HPLPRLLRPP GWAPTPGAAA AAGPLALPAP AGTADAGAPA
1310 1320 1330 1340 1350
TAADGATACD GCGVDASGDL GSSSSGKGGG GVDDASRYSE QGPAPRHLYC
1360 1370 1380 1390 1400
FVMEPLARFP GGGGGGGFGS GFGSGFSFGS EPNPGSGGHA STVASSSGEG
1410 1420 1430 1440 1450
AAAAAAETGL LQWPYTASAA AAGSNAAEPA AAAADNGGGG GGDDPMALWR
1460 1470 1480 1490 1500
VRRIAGELAA AGPPLAPGAG GGAVQQGGSG SSGSSSTAGK GSSSSSSGSG
1510 1520 1530 1540 1550
GGGAALHVLS STAMAAAGAC WVPTARNAAA AAAELQLQQR QQKQQQQQAG
1560 1570 1580 1590 1600
QAQQQQQQQQ QSDTMEQDAP PSGGGGGGGG AAAATAAASA AAATATATAT
1610 1620 1630 1640 1650
ATVLSWGVLL HGRLPAGLPA VELFVPDRKK GELTERETRA RVRLAYLGEL
1660 1670 1680 1690 1700
PSPPTQPPAE DAVAQGSLAA ASAASATAGA DGAGNGGGAA AAAAELVAAV
1710 1720 1730 1740 1750
GSAAHSLLRF PLPVALARAK ALKAAASGAV PASSAATDTA ADPAAAPAAE
1760 1770 1780 1790 1800
WVGFQRVAAA LEAAAAAAAN GPAAGGASGG GGGGVEAALK EAVALAAAAG
1810 1820 1830 1840 1850
NGGADDAGGM EDASEAQAAE VAEAAEAGLQ AHAQGGTAAA AGGAAVAAVA
1860 1870 1880 1890 1900
EAGRQQQGRG GGRGRKGWVG YWWLPVPLRP PPPPPPPAEV TEAVAAGPAG
1910 1920 1930 1940 1950
AGAAAGTAMD VDVDLDLGAA ATAAATASDG PCRGRTGDQS SAAAALSYID
1960 1970 1980 1990 2000
WRVVGGLAAP PAPLPADAAT AVPLNAAAAA TTTASQNAAL AAVNSVAGAA
2010 2020 2030 2040 2050
QPPSAVAGAA GAAVAGAGGA AVAGAPAPPC CYVWRQEVVR HGLFISLDSF
2060 2070 2080 2090 2100
RMCTFLEPQA PSAAATATAV AGDATVVPAA GAQGRLQQLL QPQPQLLQPP
2110 2120 2130 2140 2150
PGQPLLVELY SYARCRSHWL SSRLQLQPGQ QQQAPRRVAV AAATAATAAG
2160 2170 2180 2190 2200
TAGAATAGAK QVDTVAPAAP GTTIPTAATA ATAQASAEAA AVTAVAGAAP
2210 2220 2230 2240 2250
AAPLSTPPES GSGGGGGATE ALMDTYDDGA GAADLADVTG NRGGVYGDGG
2260 2270 2280 2290 2300
LGGGGSSGGG GDGSSSSLSG RKRARQPPGQ GLYSTAPSPP RSPPRLRPHL
2310 2320 2330 2340 2350
EQEQQQQQQQ EQQQQQQHRH NGNSSNNNGL SASPANDTGS AADGGGWAPV
2360 2370 2380 2390 2400
PPAVAPVATP AATATTTKTA TATTAAAAAT TTSTTKRLPR EVVAPLPPDT
2410 2420 2430 2440 2450
GPGRLARFPL DAGRWRALQG LPPLLWRVEG LVAAAEALER VLRPLGFAPE
2460 2470 2480 2490 2500
KATGGRSDSG GGAEPAAATT TATAAAAGTA APGGGGNNSG DGGGGGRDEA
2510 2520 2530 2540 2550
MADANRDVPS APPPPPPLPP PPPLPPPPPL PPHLTHQPPP PPPPPLPPPP
2560 2570 2580 2590 2600
PLPPPLLPPP LPPLVLAAAA LTAPAAGDAC LNNDRLEFLG DSVLKHIAVL
2610 2620 2630 2640 2650
FTFLRDRHDP TCHEGVLSFK RDALIANEVA MDVATDFCVR AGLLPPDAQL
2660 2670 2680 2690 2700
VIREGLHAEA STQRAAAAAA AAAAAATAAA AATAAAASGG KDAAAAAAGG
2710 2720 2730 2740 2750
SAAAAGAAAG AGPAAAAAAV AAAAKSTSTR TSVPDVTLAF KSLQPLTFRE
2760 2770 2780 2790 2800
SWLRRGGAIE AADDDATADP AAGATAGRSG GRAAASGGGA ASSPWRADTW
2810 2820 2830 2840 2850
GGGGGGSSRS VPASPSPYTH VTPQKQQPRP AVAAPGPYVS YTAFVAPYTP
2860 2870 2880 2890 2900
PALAAPAAAA AATAAAATGC SGAPVSPMRL LPRAATGSPL PPIVGTRRLV
2910 2920 2930 2940 2950
IAHASPPLPA ATADAATANA ATALVGAAAA SVGAARRVVP VLPWARRPAV
2960 2970 2980 2990 3000
APVAAVAAVA AAAGAPVAAA AATPRRRPLP GTPVAATATA ATATAAATFA
3010 3020 3030 3040 3050
AAAALTPPAV AAAAGTLTPA STPAATSAWA QAERAQAAAE AVAGLDLSMG
3060 3070 3080 3090 3100
AGVASPPALQ QFQPVQQQQQ WQQLQQWQQL QLWQQQQQTQ TQMQQMPNFS
3110 3120 3130 3140 3150
PPYRQQQQHQ TQQLAVAATA APGGQGPPQQ QNTWEPPQPL SVFVLAEAHA
3160 3170 3180 3190 3200
ATTTIAAPPG GTNGADASAA TGAAAGAGAA PVTEGLPPGA REGKPSTGGG
3210 3220 3230 3240 3250
SVWARQLADE DGDEEDKDDD ERVPAAGAAA AASATAAAAA AATVMRRGLY
3260 3270 3280 3290 3300
GGGVSAGRRG DVDLVAAVTR RVLGGCYCFR RPELCLQALT HVSHPRAAGC
3310 3320 3330 3340 3350
GGGYQRLEFL GDAVMGTVVS FWLFRAGGSA EAMTARRKAL VSNGPLAAAA
3360 3370 3380 3390 3400
VCLGLQRHLR VGSSALLGTL GAFVEEVQAA LEDGSLASGR VSVTTADRLA
3410 3420 3430 3440 3450
KNKRAERRAQ QRAAVAAAAA RKKDGESKMK QQQETGKEQG PGPPTDQRME
3460 3470 3480 3490 3500
EAGRAPAAAA AAAVPKKGAA AAAAAAAAAA AAAAVPRVRV LCAPKVLADV
3510 3520 3530 3540 3550
VEALIGAVYL DSGGDLAAAE AAAAALTRPL AALPSLLPPP PPGQSQRPSL
QTYYAP
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DS496123 Genomic DNA Translation: EDP03914.1 |
RefSeqi | XP_001692436.1, XM_001692384.1 |
Genome annotation databases
GeneIDi | 5718140 |
KEGGi | cre:CHLREDRAFT_12013 |
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DS496123 Genomic DNA Translation: EDP03914.1 |
RefSeqi | XP_001692436.1, XM_001692384.1 |
3D structure databases
ProteinModelPortali | A8ITW8 |
ModBasei | Search... |
MobiDBi | Search... |
Protein-protein interaction databases
STRINGi | 3055.EDP03914 |
Proteomic databases
PaxDbi | A8ITW8 |
ProMEXi | A8ITW8 |
Protocols and materials databases
Structural Biology Knowledgebase | Search... |
Genome annotation databases
GeneIDi | 5718140 |
KEGGi | cre:CHLREDRAFT_12013 |
Phylogenomic databases
InParanoidi | A8ITW8 |
OrthoDBi | 1337630at2759 |
Family and domain databases
CDDi | cd00079 HELICc, 1 hit cd00593 RIBOc, 2 hits |
Gene3Di | 1.10.1520.10, 3 hits |
InterProi | View protein in InterPro IPR014001 Helicase_ATP-bd IPR001650 Helicase_C IPR027417 P-loop_NTPase IPR000999 RNase_III_dom IPR036389 RNase_III_sf |
Pfami | View protein in Pfam PF00271 Helicase_C, 1 hit PF00636 Ribonuclease_3, 2 hits |
SMARTi | View protein in SMART SM00487 DEXDc, 1 hit SM00535 RIBOc, 2 hits |
SUPFAMi | SSF52540 SSF52540, 2 hits SSF69065 SSF69065, 2 hits |
PROSITEi | View protein in PROSITE PS51192 HELICASE_ATP_BIND_1, 1 hit PS51194 HELICASE_CTER, 1 hit PS00517 RNASE_3_1, 2 hits PS50142 RNASE_3_2, 2 hits |
ProtoNeti | Search... |
Entry informationi
Entry namei | A8ITW8_CHLRE | |
Accessioni | A8ITW8Primary (citable) accession number: A8ITW8 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | December 4, 2007 |
Last sequence update: | December 4, 2007 | |
Last modified: | February 13, 2019 | |
This is version 61 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |