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Protein
Submitted name:

Predicted protein

Gene

CHLREDRAFT_96655

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHelicaseUniRule annotation, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:CHLREDRAFT_96655Imported
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiA8ICS4

Interactioni

Protein-protein interaction databases

STRINGi3055.EDP06385

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini149 – 177Q_MOTIFInterPro annotationAdd BLAST29
Domaini180 – 354Helicase ATP-bindingInterPro annotationAdd BLAST175
Domaini365 – 536Helicase C-terminalInterPro annotationAdd BLAST172

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili528 – 563Sequence analysisAdd BLAST36

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi149 – 177Q motifPROSITE-ProRule annotationAdd BLAST29

Sequence similaritiesi

Belongs to the DEAD box helicase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0338 Eukaryota
COG0513 LUCA
InParanoidiA8ICS4
KOiK13181

Family and domain databases

CDDicd00079 HELICc, 1 hit
InterProiView protein in InterPro
IPR011545 DEAD/DEAH_box_helicase_dom
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR000629 RNA-helicase_DEAD-box_CS
IPR014014 RNA_helicase_DEAD_Q_motif
PfamiView protein in Pfam
PF00270 DEAD, 1 hit
PF00271 Helicase_C, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS00039 DEAD_ATP_HELICASE, 1 hit
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit
PS51195 Q_MOTIF, 1 hit

Sequencei

Sequence statusi: Fragment.

A8ICS4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
DDDEEGAEED GEDEEDGEDD EEEEEEEEQA QPSGKQARAK QQQQQQQQQK
60 70 80 90 100
AKGRAKPESE EEEDDGDDEE EGDGAGSSGD DEEMDEDDDE DGEEEGDEEE
110 120 130 140 150
EEDRRPSTSG RGDKAAAAKG AKASAAAAGK GGKGTFYSET PEGTKFSSAS
160 170 180 190 200
FADLNISRPL LKAVEALGYK SPTPIQAACI PLALAGRDIC GSAVTGSGKT
210 220 230 240 250
AAFALPFLER LLHRPRGLAA TYVLVLTPTR ELAVQIHSMI EKLAQFTDIN
260 270 280 290 300
VALIVGGLSL QVQAITLRQS PEVVVATPGR LIDHLRNSQS VGLEDLAVLV
310 320 330 340 350
LDEADRLLEM GFREEVAEVV RAAPRKRQTM LFSATFNDQV RDLVALSLKQ
360 370 380 390 400
PVRLAADAAR AAPKLLTQEI VRLKGPAAAA TKEAVCLALC ARSFGDRGRT
410 420 430 440 450
IVFCSTKTKA HRLKILFGLA GLPPAAELHG NMSQTARLES LESFRRGDTA
460 470 480 490 500
FLLATDVAAR GLDIQGVEVV VNYDAPPKLE TYLHRIGRTA RAGAAGVAVT
510 520 530 540 550
LVEDGDRGLL KELGKKVGRA RLVPAAAVVQ WQSRVERLER DVRAILAEER
560 570 580 590 600
DEADLRKAEM EANKAVNMME HESEIMSRPK RTWFVTEKQK RELAARSAQA

AG
Length:602
Mass (Da):65,097
Last modified:December 4, 2007 - v1
Checksum:i8094D1EC8AEAE3FC
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei602Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS496115 Genomic DNA Translation: EDP06385.1
RefSeqiXP_001702606.1, XM_001702554.1

Genome annotation databases

EnsemblPlantsiEDP06385; EDP06385; CHLREDRAFT_96655
GeneIDi5728277
GrameneiEDP06385; EDP06385; CHLREDRAFT_96655
KEGGicre:CHLREDRAFT_96655

Similar proteinsi

Entry informationi

Entry nameiA8ICS4_CHLRE
AccessioniPrimary (citable) accession number: A8ICS4
Entry historyiIntegrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: April 25, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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