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Entry version 87 (02 Jun 2021)
Sequence version 1 (04 Dec 2007)
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Protein
Submitted name:

Flagellar associated protein

Gene

FAP148

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Protein family/group databases

Transport Classification Database

More...
TCDBi
1.A.4.1.14, the transient receptor potential ca(2+) channel (trp-cc) family

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Flagellar associated proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:FAP148Imported
ORF Names:CHLREDRAFT_140842Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3055 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeChlorophytacore chlorophytesChlorophyceaeCS cladeChlamydomonadalesChlamydomonadaceaeChlamydomonas

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei1271 – 1292HelicalSequence analysisAdd BLAST22
Transmembranei1350 – 1371HelicalSequence analysisAdd BLAST22
Transmembranei1377 – 1399HelicalSequence analysisAdd BLAST23
Transmembranei1420 – 1441HelicalSequence analysisAdd BLAST22
Transmembranei1490 – 1511HelicalSequence analysisAdd BLAST22

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cell projection, Cilium, FlagellumImported, Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
A8IAT9

PRoteomics IDEntifications database

More...
PRIDEi
A8IAT9

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
A8IAT9, differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
3055.EDP06430

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini7 – 95WD_REPEATS_REGIONInterPro annotationAdd BLAST89
Domaini144 – 902WD_REPEATS_REGIONInterPro annotationAdd BLAST759
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati144 – 185WDPROSITE-ProRule annotationAdd BLAST42
Repeati186 – 227WDPROSITE-ProRule annotationAdd BLAST42
Repeati270 – 311WDPROSITE-ProRule annotationAdd BLAST42
Repeati398 – 439WDPROSITE-ProRule annotationAdd BLAST42
Repeati605 – 646WDPROSITE-ProRule annotationAdd BLAST42
Repeati690 – 731WDPROSITE-ProRule annotationAdd BLAST42
Repeati733 – 774WDPROSITE-ProRule annotationAdd BLAST42
Repeati819 – 860WDPROSITE-ProRule annotationAdd BLAST42

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni996 – 1036DisorderedSequence analysisAdd BLAST41
Regioni1595 – 1630DisorderedSequence analysisAdd BLAST36

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1571 – 1591Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, RepeatARBA annotation, Transmembrane, Transmembrane helixSequence analysisARBA annotation, WD repeatPROSITE-ProRule annotationARBA annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0271, Eukaryota
KOG3676, Eukaryota
KOG4155, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_239952_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
A8IAT9

Identification of Orthologs from Complete Genome Data

More...
OMAi
YADNISA

Database of Orthologous Groups

More...
OrthoDBi
33880at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.130.10.10, 5 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR005821, Ion_trans_dom
IPR015943, WD40/YVTN_repeat-like_dom_sf
IPR001680, WD40_repeat
IPR019775, WD40_repeat_CS
IPR017986, WD40_repeat_dom
IPR036322, WD40_repeat_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00520, Ion_trans, 1 hit
PF00400, WD40, 7 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00320, WD40, 18 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF50978, SSF50978, 3 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00678, WD_REPEATS_1, 3 hits
PS50082, WD_REPEATS_2, 8 hits
PS50294, WD_REPEATS_REGION, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Fragment.

A8IAT9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRTTVTLGEV TEGITCCHIA AENDFVVVGS SKGNLYTWDT DTGTVAHMYE
60 70 80 90 100
AGHKGPVQFA QVYNLPSYGR CVVSCGAKDH TVVVWDLLSG EPRALIEIKE
110 120 130 140 150
LEHAKNLRYD VTRDGARVVV WCTDSVPFPN LVVVDVMSQN KISVYCHEGL
160 170 180 190 200
VRQAVFTPNG DRIVSSGNDN KLQVWDTFSL ENLVTMTGHE GSVLCCAVNE
210 220 230 240 250
AATRVVSGGE DCAVRLWSLE DGKQLLAFQA QDEPIKTVQF SSSGQKILSC
260 270 280 290 300
DVTGRVYVWS MHAEFLTNLM RRYADNISAV TMSNDMKLCL VGCNNGRVML
310 320 330 340 350
WDVERRESMW EYTHHTGRVE AAAFNSMRDM CATAGADGRI VLLFADSGKQ
360 370 380 390 400
ANSFLGAEEP MMTVQFSPDD ERIAGCAADG KLYLYQTAGS SRKPKAVLRS
410 420 430 440 450
NVARILNHVW SPNSKLVAGS CSDGTMMVWN ASSGGIHSVL EGAAAAATCC
460 470 480 490 500
CFDLIGKLLA VGTVLGSTLL YNLETSELLV ELKGNASPLK EVVFNQETSQ
510 520 530 540 550
LTTMCSRQAA VWDVATASKI RVFDFVMDKA GDFKSPPHPY RWAVAHNSTV
560 570 580 590 600
LFDHESEALV LDMLTIDDPL LRSYYLADVQ TIASGFNHRK LLVWSAAGSN
610 620 630 640 650
APDKFHTTHD AITSTHFSHD DRLVVMGTQD GNVVVYDVVH GETVEMIVGH
660 670 680 690 700
QNGPCRCVKL SADNREVLSS GADSKVVLWD WRKRAPLRIY SGHFVSIGCC
710 720 730 740 750
DISAQGNRVV SGDNHGMICV WEKDSGNSVQ TLPLAHSKAV LSVSISADGS
760 770 780 790 800
TIASVGADDK VSIWNVDIGI ELVSLTAAME SHPLYCSFSP DGNKLAVTES
810 820 830 840 850
NGNVMVWNVA AGCQWYMIYQ AHKGKVTGCS WSADCRKFTT CGTDSVTAVW
860 870 880 890 900
DAEGGQPLFK FNLKAGPLTS CAVSPSGLYV AAGSTTGTLS VSNLAMASRS
910 920 930 940 950
TPEPSFLFHW LATHELKQSN FLWMRLLAMY PYLTNVQDAQ GWSIALHALS
960 970 980 990 1000
RGNAEVSNLI LDSLSNDCGI LGLISAVPFA IATRVKIHQE ETGGLFGGGG
1010 1020 1030 1040 1050
GDKAARPTSA WGGGGERSGG ARPRTALGTG SMADGNKSAR RASLAFLGGG
1060 1070 1080 1090 1100
KDDDGQLLGP DMRQNSNLRD VLVQKSKASF SQNLKKVAVE MVTEARDHDQ
1110 1120 1130 1140 1150
MALIQNNAVA LALNSKSSEC VQAVLDSAAS NKVSWGSYHA ITDMMPSLAL
1160 1170 1180 1190 1200
RYPIMCYHFL AALNLRHLGD LEVPVAVLKG LDRSVIRTAP IFTNVKNLWQ
1210 1220 1230 1240 1250
GHLKLHEVKF GPQPYAHVKA SMVRLPYACS IGRDSLLQTL VESDVPVKVY
1260 1270 1280 1290 1300
GTPTLRAIIK HKWRLYARRK LLVRSLIYVF YVIMFTVTGV LFSMENHALT
1310 1320 1330 1340 1350
MSQYWATAAG KAHFIIDGYI FAQTAWYAWT ELSQMYAIGL SMYFKSYWNT
1360 1370 1380 1390 1400
FDTTMITLVL IIPPLHVIRL TDDAGGALAP MIAFAMILVW FKSLFYGLAF
1410 1420 1430 1440 1450
EPFGPIVNMV FQVARAIRQF CVMLFMCMCS FGVALMVLSQ YSQFTTGRPE
1460 1470 1480 1490 1500
QFSRDGTQDF GRTMFTMWRG VLGQFDIAWA WGSTWQELSL IFFSGFMFLV
1510 1520 1530 1540 1550
QILLLNMLIA LMREVYNRVK HTEEDVFLKG RASLIVEVET LMARKQLERY
1560 1570 1580 1590 1600
ANMPPYVHLL TPVRRGDTRE RSGIEARLEK LEQMLMKLQD ALDQGLSGPR
1610 1620 1630 1640 1650
GQGGGGPSGP SGPVGQLITG DHGDGSNINT AGLTQEQLNL IQMQAGKLKE
1660 1670 1680 1690 1700
MEDQFPAVIR QLDRVQRSVN NQELRLEGVV TVLRDIENLL RNQQPVVIHQ
1710 1720 1730
ENRPAPRRGS ILTEAELEAE VKRLLGKGEE KL
Length:1,732
Mass (Da):190,050
Last modified:December 4, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iAA82443D3E54364A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section is used for sequence fragments to indicate that the residue at the extremity of the sequence is not the actual terminal residue in the complete protein sequence.<p><a href='/help/non_ter' target='_top'>More...</a></p>Non-terminal residuei1732Imported1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
DS496115 Genomic DNA Translation: EDP06430.1

NCBI Reference Sequences

More...
RefSeqi
XP_001702651.1, XM_001702599.1

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
PNW77392; PNW77392; CHLRE_10g434600v5

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
5728015

Gramene; a comparative resource for plants

More...
Gramenei
PNW77392; PNW77392; CHLRE_10g434600v5

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
cre:CHLREDRAFT_140842

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS496115 Genomic DNA Translation: EDP06430.1
RefSeqiXP_001702651.1, XM_001702599.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi3055.EDP06430

Protein family/group databases

TCDBi1.A.4.1.14, the transient receptor potential ca(2+) channel (trp-cc) family

Proteomic databases

PaxDbiA8IAT9
PRIDEiA8IAT9

Genome annotation databases

EnsemblPlantsiPNW77392; PNW77392; CHLRE_10g434600v5
GeneIDi5728015
GrameneiPNW77392; PNW77392; CHLRE_10g434600v5
KEGGicre:CHLREDRAFT_140842

Phylogenomic databases

eggNOGiKOG0271, Eukaryota
KOG3676, Eukaryota
KOG4155, Eukaryota
HOGENOMiCLU_239952_0_0_1
InParanoidiA8IAT9
OMAiYADNISA
OrthoDBi33880at2759

Gene expression databases

ExpressionAtlasiA8IAT9, differential

Family and domain databases

Gene3Di2.130.10.10, 5 hits
InterProiView protein in InterPro
IPR005821, Ion_trans_dom
IPR015943, WD40/YVTN_repeat-like_dom_sf
IPR001680, WD40_repeat
IPR019775, WD40_repeat_CS
IPR017986, WD40_repeat_dom
IPR036322, WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00520, Ion_trans, 1 hit
PF00400, WD40, 7 hits
SMARTiView protein in SMART
SM00320, WD40, 18 hits
SUPFAMiSSF50978, SSF50978, 3 hits
PROSITEiView protein in PROSITE
PS00678, WD_REPEATS_1, 3 hits
PS50082, WD_REPEATS_2, 8 hits
PS50294, WD_REPEATS_REGION, 2 hits

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA8IAT9_CHLRE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A8IAT9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: June 2, 2021
This is version 87 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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