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Entry version 64 (11 Dec 2019)
Sequence version 1 (04 Dec 2007)
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Protein
Submitted name:

Predicted protein

Gene

CHLREDRAFT_146309

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Predicted proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:CHLREDRAFT_146309Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3055 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
A8HPQ1

Protein Mass spectra EXtraction

More...
ProMEXi
A8HPQ1

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
3055.EDP09674

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1509 – 1569PHD-typeInterPro annotationAdd BLAST61

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni10 – 487DisorderedSequence analysisAdd BLAST478
Regioni502 – 547DisorderedSequence analysisAdd BLAST46
Regioni700 – 782DisorderedSequence analysisAdd BLAST83
Regioni876 – 921DisorderedSequence analysisAdd BLAST46
Regioni944 – 963DisorderedSequence analysisAdd BLAST20
Regioni1040 – 1083DisorderedSequence analysisAdd BLAST44
Regioni1136 – 1223DisorderedSequence analysisAdd BLAST88
Regioni1235 – 1324DisorderedSequence analysisAdd BLAST90
Regioni1478 – 1497DisorderedSequence analysisAdd BLAST20
Regioni1911 – 1988DisorderedSequence analysisAdd BLAST78
Regioni2053 – 2089DisorderedSequence analysisAdd BLAST37
Regioni2136 – 2158DisorderedSequence analysisAdd BLAST23
Regioni2183 – 2421DisorderedSequence analysisAdd BLAST239

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi276 – 295PolyampholyteSequence analysisAdd BLAST20
Compositional biasi349 – 369PolarSequence analysisAdd BLAST21
Compositional biasi510 – 524PolyampholyteSequence analysisAdd BLAST15
Compositional biasi525 – 541Pro-richSequence analysisAdd BLAST17
Compositional biasi767 – 782AcidicSequence analysisAdd BLAST16
Compositional biasi1239 – 1270AcidicSequence analysisAdd BLAST32
Compositional biasi1291 – 1312Pro-richSequence analysisAdd BLAST22
Compositional biasi1478 – 1494PolyampholyteSequence analysisAdd BLAST17
Compositional biasi2206 – 2221Pro-richSequence analysisAdd BLAST16
Compositional biasi2222 – 2237PolarSequence analysisAdd BLAST16
Compositional biasi2291 – 2390PolarSequence analysisAdd BLAST100

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IEVA Eukaryota
ENOG410Y9P5 LUCA

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
A8HPQ1

Database of Orthologous Groups

More...
OrthoDBi
119552at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR016181 Acyl_CoA_acyltransferase
IPR032308 Jas
IPR011011 Znf_FYVE_PHD
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF16135 Jas, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00249 PHD, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF55729 SSF55729, 1 hit
SSF57903 SSF57903, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50016 ZF_PHD_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A8HPQ1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MYDLWATEAS ASGLTGAKRR SGAVAAAAPG GVAARAGGGG GPPAAKRAKQ
60 70 80 90 100
EAGTPRAAEA SKAQPKAAAA AAAGSSRRPP RSAAAAAAVA DADAKPESTA
110 120 130 140 150
PKSAAKSKGK TTAEDAGATS KQPAPKGKTT AKAAENDADE DKAADAAQAT
160 170 180 190 200
AVAAKKDDAA GGKKGKAVAK KAGAAEAASG EAAGDKNGKA TAKAGKGEAA
210 220 230 240 250
GVKAEAAEPQ YSGAADAKRA GGAKGKGAQQ AKKKDGAADA ETAAATTSEA
260 270 280 290 300
EEVKPEPGEP KPQGKRKAAA ASGKKGKGHG QEEVVEPKEE KEEAVAGPST
310 320 330 340 350
AAAADSQATD GGKPAASTAA ASEKQAASGK GKRGAAAADA KKPAARTPSR
360 370 380 390 400
KTASASAASK DNAAAAGSNK EATSPGEGVK TAEATEDAEM KDAEVNAEAP
410 420 430 440 450
AVGSEGAGGK DAAAAAGSSK EEHGGEAAGS KDAAAASAKA GERSTRLPRR
460 470 480 490 500
SKLLKPTPAD AAPKPAGADA TAAGTAEPAA DAAAMSAKLA GGDNEAVAGV
510 520 530 540 550
KAEAADEPAA DAAASKDDDA GDATAPKPPR PPPPPGPPGF KEDPDWLDWP
560 570 580 590 600
IKLTDEHVDF IRTLAHKVFA AKEAPPRDAK ALLRCSGMWG RKLEYRKRDG
610 620 630 640 650
REGTYRPIFS GIVTDKGTLA CTCEACKEER THSLTEFEVH CGGTHKKPAD
660 670 680 690 700
HTWVIELGLN LRDLALMTCR CLGLGHIAAG TGQGRISGAA VKAALGESAL
710 720 730 740 750
GTGEGKKRSG GGKPRKSAAA AAAAGGAEGE GGTAALVSSR PRGTGGSPAG
760 770 780 790 800
RKPGRLRAAG SSTETESDVE TETETEDDLD DFEEQVERTA PTGGTARQRA
810 820 830 840 850
AAAQGAAAVA TAGVAGWDRH APVPAGTCTV CLRALPENYK ELAAAPVNAT
860 870 880 890 900
VLSCSKCQGH CHTSCAAPFG LPPPKPATAA APAAAPAVDA PAPQPAAAPE
910 920 930 940 950
QAPEGAAPST QPAAAAPAAA PAADAAPVAD AAQAADAVMV EAGEPTAQAA
960 970 980 990 1000
DAPSVDAAAP APAPADAPAA VAAEASAAPA ADASADAPAV AAAADTAAVA
1010 1020 1030 1040 1050
TDAAISVAAT CDWQCPHCRQ VGRGKRMKRP NPTYLDQDAA ATATAAGPAP
1060 1070 1080 1090 1100
ERLGRGRGRG GRPPGPGVAI GGGRGRGRGR GRNVMNMTQA EIAEMYFSKA
1110 1120 1130 1140 1150
RMAMAKGGDG TIPKPTFSSG AGGALGGLDG AAPAAERVPA AEGAAEAAAT
1160 1170 1180 1190 1200
APAEGAAAHP PATAPGGAVT AAPTDTAAAG GEVAAAGTSG TAAQVPTQPG
1210 1220 1230 1240 1250
DAAATSAAPA DVDAAKEKAK REQEDAALAR AIAIAEGWGE EEYGEEYGEE
1260 1270 1280 1290 1300
DEEDDDDEDE EEEAVDEDDE DYEGARRRKR PKAAVAPPPR THFSMAPPPM
1310 1320 1330 1340 1350
PSPVPRPAGA PAGAAPGPAG GGGRIQMTLP VTMRASAARS NASARRQVCG
1360 1370 1380 1390 1400
RTLFDGLPGG LKHDDIVWYT LQGKRLLRGV VQLQACGAAT SGILCGHCDT
1410 1420 1430 1440 1450
IISASAFEAH AGHKHRRNPY EAILTDDGMT LKRIAERLMP IAASQAGHAS
1460 1470 1480 1490 1500
PPQPRAKGAG GALAAAAAAV AAAAHAAAAV HHDDHQHHHD GGEAGEDDDD
1510 1520 1530 1540 1550
VEMVELVDDA ACVLCHEPDF DREGFSDKTV LICDQCEKEY HIGCLRQHKM
1560 1570 1580 1590 1600
VDMQAVPEGE WFCSDECVRI RDALGEDVAA GEVLMPGNPA YRWQILRGKN
1610 1620 1630 1640 1650
GRQQTWHALS TVLNILQESF DPIIDTGSGS DLLPAMVNAE TAGDYDFQGM
1660 1670 1680 1690 1700
YSILLRYRGP DKEARGKPVL AALFRVLGSS MAEMPLVATR YDCRRQGHLR
1710 1720 1730 1740 1750
ALVDAMRHKL LGLGVRAIVL PATADAQPAW RQLQFQDLDE PSTRVARSEH
1760 1770 1780 1790 1800
RMVIFPHTTV LARPLIRVPG YDQSQLQSAH EAADPAFIAA CAKAMEEARV
1810 1820 1830 1840 1850
ASGKEIVDSE EKIYAAMDDA AAAAAEVQAA KAAALAEQGI FVGRGRGRGR
1860 1870 1880 1890 1900
GRGRGRGFAA AAATGGGYGA PYSAAGPVEV DAYGQPVEGE PYSGAGGPYP
1910 1920 1930 1940 1950
GAPPHLALLP GSPGAPGRGR GRGRGRRGRP PMSAHVAYPH PGAVAGDPGA
1960 1970 1980 1990 2000
GDYPAAPPEG DDGMAAYGEG AGEGDDGEEG DDTWAGYGGV GEVASAVGSA
2010 2020 2030 2040 2050
VAAGETGEGM MTAAMGAASR FSMGPLQGAM VAAAAAAAAA AAKQYAPQMA
2060 2070 2080 2090 2100
AVDAAGRPRQ PSDGTDAAGM PAAAFGMPPP QQPGQGLAAF GAAASGASVA
2110 2120 2130 2140 2150
GMAPGYGADA AGQAGAQAPA AVAAAAAAYK WALEQFTQKQ HQQQPPAPAA
2160 2170 2180 2190 2200
GPGPESTGAA AYGMAARAYG NAMNAGMAAA TAARTSGGGA PPTGAWSSQP
2210 2220 2230 2240 2250
PGWPQPQQVH YQPPTSQPPQ PVSLQPSQQQ LQACNFLASL TGGGGLSSGG
2260 2270 2280 2290 2300
APPGPAAGAP GSSWGAPPAQ APQAAQHSYQ PPPQPQPPQQ HHHQPHQLHQ
2310 2320 2330 2340 2350
QPHQMQGGMV AYHQTHQQPL SAAQPQHYQQ QPGAWPQAAA GGSNPSLTDQ
2360 2370 2380 2390 2400
NYHETLAALQ RQQERQNQQA LLGIPPAQQQ QAQQHPQFPQ HGGYPTGIAP
2410 2420 2430 2440
PQQPPQQQQQ YGYPDPQAAA QQAAAQFAAY GQYGGPAGAP GLFGQQPQR
Length:2,449
Mass (Da):245,481
Last modified:December 4, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iB7E45F8923306528
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
DS496108 Genomic DNA Translation: EDP09674.1

NCBI Reference Sequences

More...
RefSeqi
XP_001689936.1, XM_001689884.1

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
PNW88190; PNW88190; CHLRE_01g018200v5

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
5715156

Gramene; a comparative resource for plants

More...
Gramenei
PNW88190; PNW88190; CHLRE_01g018200v5

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
cre:CHLREDRAFT_146309

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS496108 Genomic DNA Translation: EDP09674.1
RefSeqiXP_001689936.1, XM_001689884.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi3055.EDP09674

Proteomic databases

PaxDbiA8HPQ1
ProMEXiA8HPQ1

Genome annotation databases

EnsemblPlantsiPNW88190; PNW88190; CHLRE_01g018200v5
GeneIDi5715156
GrameneiPNW88190; PNW88190; CHLRE_01g018200v5
KEGGicre:CHLREDRAFT_146309

Phylogenomic databases

eggNOGiENOG410IEVA Eukaryota
ENOG410Y9P5 LUCA
InParanoidiA8HPQ1
OrthoDBi119552at2759

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR016181 Acyl_CoA_acyltransferase
IPR032308 Jas
IPR011011 Znf_FYVE_PHD
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF16135 Jas, 1 hit
SMARTiView protein in SMART
SM00249 PHD, 2 hits
SUPFAMiSSF55729 SSF55729, 1 hit
SSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS50016 ZF_PHD_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA8HPQ1_CHLRE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A8HPQ1
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: December 11, 2019
This is version 64 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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