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Protein

30S ribosomal protein S12

Gene

rps12

Organism
Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciIHOS453591:G1G9W-257-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S12UniRule annotation
Gene namesi
Name:rps12UniRule annotation
Ordered Locus Names:Igni_0247
OrganismiIgnicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
Taxonomic identifieri453591 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeIgnicoccus
Proteomesi
  • UP000000262 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000497881 – 14730S ribosomal protein S12Add BLAST147

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi453591.Igni_0247

Structurei

3D structure databases

SMRiA8A929
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS12 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04255 Archaea
COG0048 LUCA
HOGENOMiHOG000040064
KOiK02950
OMAiKFRWSQR
OrthoDBiPOG093Z01ES

Family and domain databases

CDDicd03367 Ribosomal_S23, 1 hit
HAMAPiMF_00403_A Ribosomal_S12_A, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR006032 Ribosomal_S12/S23
IPR022863 Ribosomal_S12_arc
IPR005680 Ribosomal_S23_euk/arc
PANTHERiPTHR11652 PTHR11652, 1 hit
PfamiView protein in Pfam
PF00164 Ribosom_S12_S23, 1 hit
PIRSFiPIRSF002133 Ribosomal_S12/S23, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00982 uS12_E_A, 1 hit
PROSITEiView protein in PROSITE
PS00055 RIBOSOMAL_S12, 1 hit

Sequencei

Sequence statusi: Complete.

A8A929-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPGKKAPNGL FAARKLERKR LKFRWSQREF KRRMLKLKEK YDPLEGAPMA
60 70 80 90 100
RGIVLEKVGV EARKPNSAVR KCVRVQLVKN GKVVTAFVPG DGGLNVISEH
110 120 130 140
DEVVIVGIGG PRGRSMGDIP GVRYKVVLVN GVSLDAILKG KKQKPVR
Length:147
Mass (Da):16,265
Last modified:October 23, 2007 - v1
Checksum:i48723ECDFA54A63B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000816 Genomic DNA Translation: ABU81431.1
RefSeqiWP_011998283.1, NC_009776.1

Genome annotation databases

EnsemblBacteriaiABU81431; ABU81431; Igni_0247
GeneIDi5561990
KEGGiiho:Igni_0247

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000816 Genomic DNA Translation: ABU81431.1
RefSeqiWP_011998283.1, NC_009776.1

3D structure databases

SMRiA8A929
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi453591.Igni_0247

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABU81431; ABU81431; Igni_0247
GeneIDi5561990
KEGGiiho:Igni_0247

Phylogenomic databases

eggNOGiarCOG04255 Archaea
COG0048 LUCA
HOGENOMiHOG000040064
KOiK02950
OMAiKFRWSQR
OrthoDBiPOG093Z01ES

Enzyme and pathway databases

BioCyciIHOS453591:G1G9W-257-MONOMER

Family and domain databases

CDDicd03367 Ribosomal_S23, 1 hit
HAMAPiMF_00403_A Ribosomal_S12_A, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR006032 Ribosomal_S12/S23
IPR022863 Ribosomal_S12_arc
IPR005680 Ribosomal_S23_euk/arc
PANTHERiPTHR11652 PTHR11652, 1 hit
PfamiView protein in Pfam
PF00164 Ribosom_S12_S23, 1 hit
PIRSFiPIRSF002133 Ribosomal_S12/S23, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00982 uS12_E_A, 1 hit
PROSITEiView protein in PROSITE
PS00055 RIBOSOMAL_S12, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRS12_IGNH4
AccessioniPrimary (citable) accession number: A8A929
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 23, 2007
Last modified: October 10, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
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