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Entry version 64 (26 Feb 2020)
Sequence version 1 (23 Oct 2007)
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Protein
Submitted name:

Rhs protein

Gene

EcE24377A_0246

Organism
Escherichia coli O139:H28 (strain E24377A / ETEC)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
ECOL331111:GH7P-244-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Rhs proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:EcE24377A_0246Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiEscherichia coli O139:H28 (strain E24377A / ETEC)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri331111 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001122 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni493 – 529DisorderedSequence analysisAdd BLAST37

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi496 – 510PolyampholyteSequence analysisAdd BLAST15

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

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HOGENOMi
CLU_001218_0_1_6

Identification of Orthologs from Complete Genome Data

More...
OMAi
YHYDLTR

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001826 RHS
IPR022385 Rhs_assc_core
IPR031325 RHS_repeat
IPR006530 YD

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF03527 RHS, 1 hit
PF05593 RHS_repeat, 5 hits

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00394 RHSPROTEIN

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR03696 Rhs_assc_core, 1 hit
TIGR01643 YD_repeat_2x, 7 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A7ZHX6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGGKPAARQG DMTRKGLDIV QGSAGVLIGA PTGVACSVCP NSPIEEQKGN
60 70 80 90 100
PVNPLLGAKV LPGETDLALP CPLPFILSRA YSSYRTRTPA PVGVFGPGWK
110 120 130 140 150
APFDIRLQVH ERELILNDSG GRSIHFEPLF PGEISYSRSE SLWLARGGVA
160 170 180 190 200
AQHSSQPLSA LWQVLPEDVR LSPHVYLATN SLQGPWWILS WPERVPGADE
210 220 230 240 250
VLPPEPPAYR VLTGVVDGFG RTLAFHRAAE GDVAGAVTGV TDGAGRRFHL
260 270 280 290 300
VLTTQAQRAE VFRKQRATSL SSPAGPRSAS SSLVFPDTLP AGTGYGTDNG
310 320 330 340 350
IRLEAVWLTH DPAYPDEQPT APLARYTYTA GGELRAVYDR SGTQVRGFTY
360 370 380 390 400
DAEHAGRMVA HHYAGRPESC YRYDDTGRVT EQVNPEGLDY RFEYGESRVI
410 420 430 440 450
ITDSLNRREV LYTEGEGGLK RVVKKEHADG SITRSEYDEA GRLKAQTDAA
460 470 480 490 500
GRRTEYSLHM ASGAVTAVTG PDGRTVRYGY NSQRQVTSVT YPDGLRSSRE
510 520 530 540 550
YDEKGRLTAE TSRSGETTRY SYDDPASELP TGIQDAMGST KQMAWSRYGQ
560 570 580 590 600
LLAFTDCSGY TTRYEYDRYG QQIAVHREEG ISTYSSYNPR GQMVSQKDAQ
610 620 630 640 650
GRETPYEYSA AGDLTATVSP DGKRSTIAYD KRGRPVSVTE GGLTRSMGYD
660 670 680 690 700
AAGRITVLTN ENGSQSTFRY DPVDRLTEQR GFDGRTQRYH YDLTRKLTQS
710 720 730 740 750
EDEGLITLWH YDASDRITHR TVNGDPAEQW QYDEHGWLTT LSHTSEGHRV
760 770 780 790 800
SVHYGYDDKG RLTGERQTVE NPETGELLWQ HETKHAYNEQ GLANRVTPDS
810 820 830 840 850
LPPVEWLTYG SGYLAGMKLG GTPLVEYTRD RLHRETVRSF GSRAGSNAAY
860 870 880 890 900
ELTSTYTPAG QLQSQHLNSL VYDRDYGWND NGDLVRISGP RQTREYGYSA
910 920 930 940 950
TGRLESVRTL APDLDIRIPY ATDPAGNRLP DPELHPDSTL TAWPDNRIAE
960 970 980 990 1000
DAHYVYHYDE YGRLTEKTDR IPTGVIRTDD ERTHHYHYDS QHRLVFHTRI
1010 1020 1030 1040 1050
QHGEPLVESR YLYDPLGRRM AKRVWRRERD LTGWMSLSRK PEETWYGWDG
1060 1070 1080 1090 1100
DRLTTVQTDT TRIQTVYQPG SFAPLIRIET DNGEREKAQC RSLAEKIQQE
1110 1120 1130 1140 1150
GSEDGHGVVF PAELVGLLDR LEGEIRANCV SSESRQWLAQ CGLTVERLAA
1160 1170 1180 1190 1200
QIEPVYLPER KIHLYHCDHR GLPLALISED GNTAWSAEYD EWGNQLNEEN
1210 1220 1230 1240 1250
PHHLHQPYRM PGQQYDKESG LYYNRHRYYD PLQGRYITPD PIGLRGGWNM
1260 1270 1280 1290 1300
YQYPLNPIQV IDPMGLDAIE NMTSGGLIYA VSGVPGLIAA NSITNSAYQF
1310 1320 1330 1340 1350
GYDMDAIVGG AHNGAADAMR HCYLMCRMTK TFGSTIADVI GKNHEAAGDR
1360 1370 1380 1390 1400
QGQPAKERIM DLKNNTVGIA CGDFSAKCSD ACIEKYNTGQ LFGLDGIKAD
1410
NPIKAKQGSS DASNY
Length:1,415
Mass (Da):157,658
Last modified:October 23, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i90AEFC2DAC239C8D
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP000800 Genomic DNA Translation: ABV20272.1

NCBI Reference Sequences

More...
RefSeqi
WP_000509144.1, NC_009801.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ABV20272; ABV20272; EcE24377A_0246

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ecw:EcE24377A_0246

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000800 Genomic DNA Translation: ABV20272.1
RefSeqiWP_000509144.1, NC_009801.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiABV20272; ABV20272; EcE24377A_0246
KEGGiecw:EcE24377A_0246

Phylogenomic databases

HOGENOMiCLU_001218_0_1_6
OMAiYHYDLTR

Enzyme and pathway databases

BioCyciECOL331111:GH7P-244-MONOMER

Family and domain databases

InterProiView protein in InterPro
IPR001826 RHS
IPR022385 Rhs_assc_core
IPR031325 RHS_repeat
IPR006530 YD
PfamiView protein in Pfam
PF03527 RHS, 1 hit
PF05593 RHS_repeat, 5 hits
PRINTSiPR00394 RHSPROTEIN
TIGRFAMsiTIGR03696 Rhs_assc_core, 1 hit
TIGR01643 YD_repeat_2x, 7 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA7ZHX6_ECO24
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A7ZHX6
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 23, 2007
Last sequence update: October 23, 2007
Last modified: February 26, 2020
This is version 64 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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