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UniProtKB - A7MBY2 (A7MBY2_DANRE)
Protein
Submitted name:
Zgc:171753 protein
Gene
alyref
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Functioni
GO - Molecular functioni
- mRNA binding Source: GO_Central
GO - Biological processi
- mRNA export from nucleus Source: GO_Central
Keywordsi
Molecular function | RNA-bindingPROSITE-ProRule annotationARBA annotation |
Names & Taxonomyi
Protein namesi | Submitted name: Zgc:171753 proteinImported |
Gene namesi | Name:alyrefImported ORF Names:zgc:171753Imported |
Organismi | Danio rerio (Zebrafish) (Brachydanio rerio)Imported |
Taxonomic identifieri | 7955 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Danionidae › Danioninae › Danio |
Organism-specific databases
ZFINi | ZDB-GENE-070928-29, alyref |
Structurei
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 125 – 202 | RRMInterPro annotationAdd BLAST | 78 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 118 | DisorderedSequence analysisAdd BLAST | 118 | |
Regioni | 211 – 280 | DisorderedSequence analysisAdd BLAST | 70 |
Phylogenomic databases
OMAi | QWLHDKA |
OrthoDBi | 1369069at2759 |
PhylomeDBi | A7MBY2 |
Family and domain databases
Gene3Di | 3.30.70.330, 1 hit |
InterProi | View protein in InterPro IPR025715, FoP_C IPR012677, Nucleotide-bd_a/b_plait_sf IPR035979, RBD_domain_sf IPR000504, RRM_dom |
Pfami | View protein in Pfam PF13865, FoP_duplication, 1 hit PF00076, RRM_1, 1 hit |
SMARTi | View protein in SMART SM01218, FoP_duplication, 1 hit SM00360, RRM, 1 hit |
SUPFAMi | SSF54928, SSF54928, 1 hit |
PROSITEi | View protein in PROSITE PS50102, RRM, 1 hit |
i Sequence
Sequence statusi: Complete.
A7MBY2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MADKMDMSLD DIIKQNRQRG GGGGRGGRGG RGGRGATTGG GRGGGGGASG
60 70 80 90 100
RLGNTGGGFG GRGGGSGPMR NRQNLSRGRS RPAPYSRPKQ LPDKWQHDLF
110 120 130 140 150
DNGYSSNAGG GGGGGGGGAG VETGGKLLVS NLDFGVSDAD IQELFAEFGT
160 170 180 190 200
LKKAAVHYDR SGRSLGTADV HFERKADALK AMKQYNGVPL DGRPMNIQLV
210 220 230 240 250
TSQIDAQRRT PMQGLNRGGG GMNRNRVGGF GMQKGRGGRG GGSRGRGRGG
260 270 280
RGGGGGSKQQ LSAEELDAQL DAYNARMDTS
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC151964 mRNA Translation: AAI51965.1 |
RefSeqi | NP_001098578.1, NM_001105108.1 |
Genome annotation databases
GeneIDi | 560127 |
KEGGi | dre:560127 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC151964 mRNA Translation: AAI51965.1 |
RefSeqi | NP_001098578.1, NM_001105108.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
GeneIDi | 560127 |
KEGGi | dre:560127 |
Organism-specific databases
CTDi | 10189 |
ZFINi | ZDB-GENE-070928-29, alyref |
Phylogenomic databases
OMAi | QWLHDKA |
OrthoDBi | 1369069at2759 |
PhylomeDBi | A7MBY2 |
Family and domain databases
Gene3Di | 3.30.70.330, 1 hit |
InterProi | View protein in InterPro IPR025715, FoP_C IPR012677, Nucleotide-bd_a/b_plait_sf IPR035979, RBD_domain_sf IPR000504, RRM_dom |
Pfami | View protein in Pfam PF13865, FoP_duplication, 1 hit PF00076, RRM_1, 1 hit |
SMARTi | View protein in SMART SM01218, FoP_duplication, 1 hit SM00360, RRM, 1 hit |
SUPFAMi | SSF54928, SSF54928, 1 hit |
PROSITEi | View protein in PROSITE PS50102, RRM, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | A7MBY2_DANRE | |
Accessioni | A7MBY2Primary (citable) accession number: A7MBY2 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | October 2, 2007 |
Last sequence update: | October 2, 2007 | |
Last modified: | January 19, 2022 | |
This is version 80 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |