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Entry version 71 (02 Jun 2021)
Sequence version 1 (21 Aug 2007)
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Protein

Clustered mitochondria protein homolog

Gene

clu1

Organism
Botryotinia fuckeliana (strain B05.10) (Noble rot fungus) (Botrytis cinerea)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria.

UniRule annotation

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Clustered mitochondria protein homologUniRule annotation
Alternative name(s):
Protein TIF31 homologUniRule annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:clu1UniRule annotation
Synonyms:tif31
ORF Names:BC1G_11770
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBotryotinia fuckeliana (strain B05.10) (Noble rot fungus) (Botrytis cinerea)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri332648 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeBotrytis

Organism-specific databases

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
FungiDB:Bcin10g03630

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cytoplasm

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003663991 – 1306Clustered mitochondria protein homologAdd BLAST1306

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

May associate with the eukaryotic translation initiation factor 3 (eIF-3) complex.

UniRule annotation

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
A6SFG0

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini336 – 580CluPROSITE-ProRule annotationAdd BLAST245
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati1032 – 1065TPR 1Add BLAST34
Repeati1074 – 1107TPR 2Add BLAST34
Repeati1116 – 1149TPR 3Add BLAST34

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 47DisorderedSequence analysisAdd BLAST47
Regioni630 – 689DisorderedSequence analysisAdd BLAST60
Regioni912 – 956DisorderedSequence analysisAdd BLAST45
Regioni1275 – 1306DisorderedSequence analysisAdd BLAST32

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 30Polar residuesSequence analysisAdd BLAST30

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the CLU family.UniRule annotation

Keywords - Domaini

Repeat, TPR repeat

Phylogenomic databases

Identification of Orthologs from Complete Genome Data

More...
OMAi
VGFPMDG

Family and domain databases

Conserved Domains Database

More...
CDDi
cd15466, CLU-central, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.40.10, 2 hits

HAMAP database of protein families

More...
HAMAPi
MF_03013, CLU, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR027523, CLU
IPR033646, CLU-central
IPR025697, CLU_dom
IPR028275, CLU_N
IPR007967, GSKIP_dom
IPR013026, TPR-contain_dom
IPR011990, TPR-like_helical_dom_sf
IPR019734, TPR_repeat

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13236, CLU, 1 hit
PF15044, CLU_N, 1 hit
PF05303, DUF727, 1 hit
PF12807, eIF3_p135, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00028, TPR, 3 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48452, SSF48452, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51823, CLU, 1 hit
PS50005, TPR, 2 hits
PS50293, TPR_REGION, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A6SFG0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAVNNEVNNA ASETPTDVSS SSQKLATEET ALTNGADHEE EDGGEAGGEV
60 70 80 90 100
FQLTVVLPRE PHKIQIIVSS QEAIHDVRQS IIELPGTFQY SCFHLEHKGE
110 120 130 140 150
RINDFVQISE VPGLTADSEI HLVEDPYTEK EARIHIIRVR ELIGAAGDRT
160 170 180 190 200
DTLNGIISGA SLLDSVTSKE SSQNGTSTAP SHPMVGFDFQ GSGNLSTLLP
210 220 230 240 250
RAQEPGPKTV KSISVSPWNP PPYHLRQKGH LLYLQVTTNE GEQFQITSHV
260 270 280 290 300
SGFYVNKSST GKFDPSPKSA PKAHSAHSLL ALLSDLSPSF EESFKGLQEY
310 320 330 340 350
NNAKEPLATF QITNATPSNP WIVPSATAPL VAHQADITRT QENYLIAGIE
360 370 380 390 400
NSETLRDWNE EFQSTRELPK DTVQDRVFRE RLTSKLFADY NDAAARGAIL
410 420 430 440 450
VARGEIAPLN PTEGKDAQIF VYNNVFFSFG ADGVGTFASE GGDEAARAAV
460 470 480 490 500
GKDVMGVRMV NQLDIDGLFT PGTVVVDYLG KRIVGQSIVP GIFKQRDPGE
510 520 530 540 550
NQIDYGAVDG KDIVASDEKF VSVFEKLSKA LKVKKHAVWD KDAKRHDLEG
560 570 580 590 600
SIETKGLLGT DGRKYVLDLY RVTPLDITWM EEVGTALDSP KEADAASESA
610 620 630 640 650
YPHRMTVIRP ELVEAYWKVK MREWVNGELE RKRQAQKAVE PAAEGKEIEA
660 670 680 690 700
ATEASEPAKS EEPPENGELA KKSESDEAAE PSKPDQERID IGDFKFALNP
710 720 730 740 750
DAFSGQQPQT DEEKTEFAED EQQVRLVCEF LRKTVLPELV KDLKEGDVGF
760 770 780 790 800
PMDGQSLSRL LHKRGINLRY LGQVATLADG KRLESLRILA VQEMVSRAFK
810 820 830 840 850
HVAGNYLRYL PIPLTSSCIA HLLNCLLGTD LNAAPKPDVD EAIAALYPEA
860 870 880 890 900
DLKFKEVTPE SLKQEIEGQV LRRFRYTLDS TWTAGIKHLQ LLREVSLKLG
910 920 930 940 950
IQLEMKPYHF TKQSQTESAA APPATNGEAT KEAAPTGKST NGKKKKKNAR
960 970 980 990 1000
EASPAAVVSA NAASPVTFNP DDILNTVPVI KEASPRSSLA EEALEAGRIS
1010 1020 1030 1040 1050
LLQDQKKLGQ ELLLESLSLH EQIYGILHPE VARVYNSLSM LYYQLDEKEA
1060 1070 1080 1090 1100
AMELARKAVI VSERTLGVDN AETLLNYLNL GLIAHASGET KLALTYIKHA
1110 1120 1130 1140 1150
LDLWKVVYGP NHPDSITTIN NAAVMLQHLK EYHDSRTWFE ASLKICEEVY
1160 1170 1180 1190 1200
GKHSINAATL LFQLAQALAL DQDSKSAVNR MRESYNIFLT ELGAEDKNTK
1210 1220 1230 1240 1250
EAEKWLEQLT QNAVSIAKHA KDVQARRNRG IRVSPRVTLG QTQVQPQIGQ
1260 1270 1280 1290 1300
TVEAAAGRDT PRGLDSRSID ELLKFIEGSD QSNQNKKRPG RSNPKRRGGA

AATAGK
Length:1,306
Mass (Da):143,626
Last modified:August 21, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iEA8FAED7FDC1528F
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CH476926 Genomic DNA Translation: EDN32665.1

NCBI Reference Sequences

More...
RefSeqi
XP_001550012.1, XM_001549962.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
5430505

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
bfu:BCIN_10g03630

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH476926 Genomic DNA Translation: EDN32665.1
RefSeqiXP_001550012.1, XM_001549962.1

3D structure databases

SMRiA6SFG0
ModBaseiSearch...

Genome annotation databases

GeneIDi5430505
KEGGibfu:BCIN_10g03630

Organism-specific databases

VEuPathDBiFungiDB:Bcin10g03630

Phylogenomic databases

OMAiVGFPMDG

Family and domain databases

CDDicd15466, CLU-central, 1 hit
Gene3Di1.25.40.10, 2 hits
HAMAPiMF_03013, CLU, 1 hit
InterProiView protein in InterPro
IPR027523, CLU
IPR033646, CLU-central
IPR025697, CLU_dom
IPR028275, CLU_N
IPR007967, GSKIP_dom
IPR013026, TPR-contain_dom
IPR011990, TPR-like_helical_dom_sf
IPR019734, TPR_repeat
PfamiView protein in Pfam
PF13236, CLU, 1 hit
PF15044, CLU_N, 1 hit
PF05303, DUF727, 1 hit
PF12807, eIF3_p135, 1 hit
SMARTiView protein in SMART
SM00028, TPR, 3 hits
SUPFAMiSSF48452, SSF48452, 2 hits
PROSITEiView protein in PROSITE
PS51823, CLU, 1 hit
PS50005, TPR, 2 hits
PS50293, TPR_REGION, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCLU_BOTFB
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A6SFG0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: August 21, 2007
Last modified: June 2, 2021
This is version 71 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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