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Protein
Submitted name:

Odf1 protein

Gene

Odf1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Odf1 proteinImported
Submitted name:
Outer dense fiber of sperm tails 1Imported
Submitted name:
Outer dense fiber protein 1Imported
Gene namesi
Name:Odf1Imported
ORF Names:mCG_122467Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 15

Organism-specific databases

MGIiMGI:97424 Odf1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSMUSG00000061923 Expressed in 26 organ(s), highest expression level in seminiferous tubule of testis

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini115 – 176SHSPInterPro annotationAdd BLAST62

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili8 – 28Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IHKT Eukaryota
ENOG4111C5F LUCA
GeneTreeiENSGT00440000038909
HOGENOMiHOG000290650
HOVERGENiHBG007863
OMAiLYYPCCL
OrthoDBiEOG091G0QI9
TreeFamiTF337986

Family and domain databases

CDDicd06482 ACD_HspB10, 1 hit
Gene3Di2.60.40.790, 1 hit
InterProiView protein in InterPro
IPR002068 A-crystallin/Hsp20_dom
IPR008978 HSP20-like_chaperone
IPR037552 ODF1_ACD
IPR037389 ODFP
PANTHERiPTHR17125 PTHR17125, 1 hit
PfamiView protein in Pfam
PF00011 HSP20, 1 hit
SUPFAMiSSF49764 SSF49764, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A6H656-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAALSCLLDS VRRDIKKVDR ELRQLRCIDE ISSRCLCDLY MHPYCCCDLH
60 70 80 90 100
PYPYCLCYSK RSRSCGLCDL YYPCCLCDYK LYCLRPSLRS LERLRRTTNR
110 120 130 140 150
ILASSCCSSN ILGSVNVCGF EPDQVKVRVK DGKVCVSAER ENRYDCLGSK
160 170 180 190 200
KYSYMNICKE FSLPPCVDEK DVTYSYGLGS CVKIESPCYP CTSPCNPCNP
210 220 230 240
CSPCSPCAPC GPCGPCGPCG PCGPCGPCDP CNPCYPCGSR FSCRKMIL
Length:248
Mass (Da):27,622
Last modified:July 24, 2007 - v1
Checksum:i39C690566E29A4D1
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q61999ODFP1_MOUSE
Outer dense fiber protein 1
Odf1 Odfp
247Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC122459 Genomic DNA No translation available.
BC145758 mRNA Translation: AAI45759.1
EU791469 mRNA Translation: ACH69794.1
CH466541 Genomic DNA Translation: EDL08799.1
RefSeqiNP_032783.2, NM_008757.3
UniGeneiMm.252830

Genome annotation databases

EnsembliENSMUST00000081966; ENSMUSP00000080632; ENSMUSG00000061923
GeneIDi18285
KEGGimmu:18285
UCSCiuc011zsh.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC122459 Genomic DNA No translation available.
BC145758 mRNA Translation: AAI45759.1
EU791469 mRNA Translation: ACH69794.1
CH466541 Genomic DNA Translation: EDL08799.1
RefSeqiNP_032783.2, NM_008757.3
UniGeneiMm.252830

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000081966; ENSMUSP00000080632; ENSMUSG00000061923
GeneIDi18285
KEGGimmu:18285
UCSCiuc011zsh.1 mouse

Organism-specific databases

CTDi4956
MGIiMGI:97424 Odf1

Phylogenomic databases

eggNOGiENOG410IHKT Eukaryota
ENOG4111C5F LUCA
GeneTreeiENSGT00440000038909
HOGENOMiHOG000290650
HOVERGENiHBG007863
OMAiLYYPCCL
OrthoDBiEOG091G0QI9
TreeFamiTF337986

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000061923 Expressed in 26 organ(s), highest expression level in seminiferous tubule of testis

Family and domain databases

CDDicd06482 ACD_HspB10, 1 hit
Gene3Di2.60.40.790, 1 hit
InterProiView protein in InterPro
IPR002068 A-crystallin/Hsp20_dom
IPR008978 HSP20-like_chaperone
IPR037552 ODF1_ACD
IPR037389 ODFP
PANTHERiPTHR17125 PTHR17125, 1 hit
PfamiView protein in Pfam
PF00011 HSP20, 1 hit
SUPFAMiSSF49764 SSF49764, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA6H656_MOUSE
AccessioniPrimary (citable) accession number: A6H656
Entry historyiIntegrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: November 7, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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