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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Lactobacillus reuteri (strain DSM 20016)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotation
Gene namesi
Name:rplMUniRule annotation
Ordered Locus Names:Lreu_1451
OrganismiLactobacillus reuteri (strain DSM 20016)
Taxonomic identifieri557436 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
Proteomesi
  • UP000001991 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000679941 – 14750S ribosomal protein L13Add BLAST147

Proteomic databases

PRIDEiA5VLH3

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliA5VLH3
SMRiA5VLH3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000225286
KOiK02871
OMAiVLMGKHK

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR005823 Ribosomal_L13_bac-type
IPR023563 Ribosomal_L13_CS
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit
TIGRFAMsiTIGR01066 rplM_bact, 1 hit
PROSITEiView protein in PROSITE
PS00783 RIBOSOMAL_L13, 1 hit

Sequencei

Sequence statusi: Complete.

A5VLH3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTTYIAKPG EVERKWYVVD AKDVPMGRLA SAVASILRGK NKPTFTPHVD
60 70 80 90 100
TGDYVIVINA AQVKLTGKKA SQKMYYRHSN YPGGLKQRTA GDFLAKEPEK
110 120 130 140
LLETAIKGML PHNSLGHKQG LKLHVYAGED HKHAAQNPEV LDITNLI
Length:147
Mass (Da):16,304
Last modified:July 10, 2007 - v1
Checksum:iD59D2B3A9E8CEE22
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000705 Genomic DNA Translation: ABQ83697.1
RefSeqiWP_003664517.1, NZ_AZDD01000010.1

Genome annotation databases

EnsemblBacteriaiABQ83697; ABQ83697; Lreu_1451
GeneIDi5189333
KEGGilre:Lreu_1451
PATRICifig|557436.17.peg.172

Similar proteinsi

Entry informationi

Entry nameiRL13_LACRD
AccessioniPrimary (citable) accession number: A5VLH3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: July 10, 2007
Last modified: May 23, 2018
This is version 75 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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