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Protein
Submitted name:

Cytochrome c, class I

Gene

Swit_4131

Organism
Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandHemePROSITE-ProRule annotation, Iron, Metal-binding

Enzyme and pathway databases

BioCyciSWIT392499:GHZK-4150-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome c, class IImported
Gene namesi
Ordered Locus Names:Swit_4131Imported
OrganismiSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)Imported
Taxonomic identifieri392499 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingomonas
Proteomesi
  • UP000001989 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 40Sequence analysisAdd BLAST40
ChainiPRO_500268847541 – 146Sequence analysisAdd BLAST106

Interactioni

Protein-protein interaction databases

STRINGi392499.Swit_4131

Structurei

3D structure databases

ProteinModelPortaliA5VDV6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini42 – 143Cytochrome cInterPro annotationAdd BLAST102

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiCOG3474 LUCA
HOGENOMiHOG000009762
KOiK08738
OMAiMAYRQAK
OrthoDBiPOG091H0FS2

Family and domain databases

Gene3Di1.10.760.10, 1 hit
InterProiView protein in InterPro
IPR009056 Cyt_c-like_dom
IPR036909 Cyt_c-like_dom_sf
IPR002327 Cyt_c_1A/1B
PANTHERiPTHR11961 PTHR11961, 1 hit
PfamiView protein in Pfam
PF00034 Cytochrom_C, 1 hit
PRINTSiPR00604 CYTCHRMECIAB
SUPFAMiSSF46626 SSF46626, 1 hit
PROSITEiView protein in PROSITE
PS51007 CYTC, 1 hit

Sequencei

Sequence statusi: Complete.

A5VDV6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTPVSAHIPD TRIGFNMNPS RHVSQIFACI LLAAGGGAHA AGDATLGQAQ
60 70 80 90 100
FARCTSCHGI SASSPPKIGP RLDGVYDRPA ASIDPAYGYS DALRLAKIRW
110 120 130 140
DDMSLDRFLA APRSFVPGNK MTFTGVADAG VRANIIAYLK TREQER
Length:146
Mass (Da):15,575
Last modified:July 10, 2007 - v1
Checksum:i4DD26FCFF5EBE816
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000699 Genomic DNA Translation: ABQ70472.1
RefSeqiWP_012050310.1, NC_009511.1

Genome annotation databases

EnsemblBacteriaiABQ70472; ABQ70472; Swit_4131
KEGGiswi:Swit_4131

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000699 Genomic DNA Translation: ABQ70472.1
RefSeqiWP_012050310.1, NC_009511.1

3D structure databases

ProteinModelPortaliA5VDV6
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi392499.Swit_4131

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ70472; ABQ70472; Swit_4131
KEGGiswi:Swit_4131

Phylogenomic databases

eggNOGiCOG3474 LUCA
HOGENOMiHOG000009762
KOiK08738
OMAiMAYRQAK
OrthoDBiPOG091H0FS2

Enzyme and pathway databases

BioCyciSWIT392499:GHZK-4150-MONOMER

Family and domain databases

Gene3Di1.10.760.10, 1 hit
InterProiView protein in InterPro
IPR009056 Cyt_c-like_dom
IPR036909 Cyt_c-like_dom_sf
IPR002327 Cyt_c_1A/1B
PANTHERiPTHR11961 PTHR11961, 1 hit
PfamiView protein in Pfam
PF00034 Cytochrom_C, 1 hit
PRINTSiPR00604 CYTCHRMECIAB
SUPFAMiSSF46626 SSF46626, 1 hit
PROSITEiView protein in PROSITE
PS51007 CYTC, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA5VDV6_SPHWW
AccessioniPrimary (citable) accession number: A5VDV6
Entry historyiIntegrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: November 7, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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