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Protein

50S ribosomal protein L19

Gene

rplS

Organism
Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L19UniRule annotation
Gene namesi
Name:rplSUniRule annotation
Ordered Locus Names:CKL_1406
OrganismiClostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
Taxonomic identifieri431943 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000002411 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000803441 – 11550S ribosomal protein L19Add BLAST115

Interactioni

Protein-protein interaction databases

STRINGi431943.CKL_1406

Structurei

3D structure databases

ProteinModelPortaliA5N817
SMRiA5N817
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bL19 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108YY1 Bacteria
COG0335 LUCA
HOGENOMiHOG000016265
KOiK02884
OMAiTITVYYE
OrthoDBiPOG091H02BF

Family and domain databases

Gene3Di2.30.30.790, 1 hit
HAMAPiMF_00402 Ribosomal_L19, 1 hit
InterProiView protein in InterPro
IPR038657 L19_sf
IPR001857 Ribosomal_L19
IPR018257 Ribosomal_L19_CS
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR15680 PTHR15680, 1 hit
PfamiView protein in Pfam
PF01245 Ribosomal_L19, 1 hit
PIRSFiPIRSF002191 Ribosomal_L19, 1 hit
PRINTSiPR00061 RIBOSOMALL19
SUPFAMiSSF50104 SSF50104, 1 hit
TIGRFAMsiTIGR01024 rplS_bact, 1 hit
PROSITEiView protein in PROSITE
PS01015 RIBOSOMAL_L19, 1 hit

Sequencei

Sequence statusi: Complete.

A5N817-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLDIIKQIES QYIRTDLPNF NIGDTVKVHV RIKEGNRQRV QVFEGIVLKR
60 70 80 90 100
QNGGVRETFT VRRVAYGVGV ERTFPVNAPI IEKIQVVRRG KVRRAKLYYL
110
RDRVGKAAKV KEILK
Length:115
Mass (Da):13,346
Last modified:July 10, 2007 - v1
Checksum:iF21396B1726E9939
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000673 Genomic DNA Translation: EDK33448.1
RefSeqiWP_012101795.1, NC_009706.1

Genome annotation databases

EnsemblBacteriaiEDK33448; EDK33448; CKL_1406
KEGGickl:CKL_1406

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000673 Genomic DNA Translation: EDK33448.1
RefSeqiWP_012101795.1, NC_009706.1

3D structure databases

ProteinModelPortaliA5N817
SMRiA5N817
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi431943.CKL_1406

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEDK33448; EDK33448; CKL_1406
KEGGickl:CKL_1406

Phylogenomic databases

eggNOGiENOG4108YY1 Bacteria
COG0335 LUCA
HOGENOMiHOG000016265
KOiK02884
OMAiTITVYYE
OrthoDBiPOG091H02BF

Family and domain databases

Gene3Di2.30.30.790, 1 hit
HAMAPiMF_00402 Ribosomal_L19, 1 hit
InterProiView protein in InterPro
IPR038657 L19_sf
IPR001857 Ribosomal_L19
IPR018257 Ribosomal_L19_CS
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR15680 PTHR15680, 1 hit
PfamiView protein in Pfam
PF01245 Ribosomal_L19, 1 hit
PIRSFiPIRSF002191 Ribosomal_L19, 1 hit
PRINTSiPR00061 RIBOSOMALL19
SUPFAMiSSF50104 SSF50104, 1 hit
TIGRFAMsiTIGR01024 rplS_bact, 1 hit
PROSITEiView protein in PROSITE
PS01015 RIBOSOMAL_L19, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRL19_CLOK5
AccessioniPrimary (citable) accession number: A5N817
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: July 10, 2007
Last modified: October 10, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
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