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Protein

50S ribosomal protein L19

Gene

rplS

Organism
Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L19UniRule annotation
Gene namesi
Name:rplSUniRule annotation
Ordered Locus Names:Tpet_1221
OrganismiThermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)
Taxonomic identifieri390874 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga
Proteomesi
  • UP000006558 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000497591 – 11550S ribosomal protein L19Add BLAST115

Interactioni

Protein-protein interaction databases

STRINGi390874.Tpet_1221

Structurei

3D structure databases

ProteinModelPortaliA5IM12
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bL19 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108YY1 Bacteria
COG0335 LUCA
HOGENOMiHOG000016265
KOiK02884
OMAiTITVYYE

Family and domain databases

Gene3Di2.30.30.790, 1 hit
HAMAPiMF_00402 Ribosomal_L19, 1 hit
InterProiView protein in InterPro
IPR038657 L19_sf
IPR001857 Ribosomal_L19
IPR018257 Ribosomal_L19_CS
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR15680 PTHR15680, 1 hit
PfamiView protein in Pfam
PF01245 Ribosomal_L19, 1 hit
PIRSFiPIRSF002191 Ribosomal_L19, 1 hit
PRINTSiPR00061 RIBOSOMALL19
SUPFAMiSSF50104 SSF50104, 1 hit
TIGRFAMsiTIGR01024 rplS_bact, 1 hit
PROSITEiView protein in PROSITE
PS01015 RIBOSOMAL_L19, 1 hit

Sequencei

Sequence statusi: Complete.

A5IM12-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDHLVKIIEK KYEKKEIPDF RPGDTVRVHV KVIEGDRERT QVFEGIVIAK
60 70 80 90 100
RGSGINKTFT VRRIGSHGVG VERIFPVHSP VVEKIEVVRK GKVRRAKLYY
110
LRNVRGKIRI KERRD
Length:115
Mass (Da):13,442
Last modified:June 26, 2007 - v1
Checksum:i2324D12D2364D2EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000702 Genomic DNA Translation: ABQ47235.1
RefSeqiWP_004081989.1, NC_009486.1

Genome annotation databases

EnsemblBacteriaiABQ47235; ABQ47235; Tpet_1221
GeneIDi29653105
KEGGitpt:Tpet_1221

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000702 Genomic DNA Translation: ABQ47235.1
RefSeqiWP_004081989.1, NC_009486.1

3D structure databases

ProteinModelPortaliA5IM12
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi390874.Tpet_1221

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ47235; ABQ47235; Tpet_1221
GeneIDi29653105
KEGGitpt:Tpet_1221

Phylogenomic databases

eggNOGiENOG4108YY1 Bacteria
COG0335 LUCA
HOGENOMiHOG000016265
KOiK02884
OMAiTITVYYE

Family and domain databases

Gene3Di2.30.30.790, 1 hit
HAMAPiMF_00402 Ribosomal_L19, 1 hit
InterProiView protein in InterPro
IPR038657 L19_sf
IPR001857 Ribosomal_L19
IPR018257 Ribosomal_L19_CS
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR15680 PTHR15680, 1 hit
PfamiView protein in Pfam
PF01245 Ribosomal_L19, 1 hit
PIRSFiPIRSF002191 Ribosomal_L19, 1 hit
PRINTSiPR00061 RIBOSOMALL19
SUPFAMiSSF50104 SSF50104, 1 hit
TIGRFAMsiTIGR01024 rplS_bact, 1 hit
PROSITEiView protein in PROSITE
PS01015 RIBOSOMAL_L19, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRL19_THEP1
AccessioniPrimary (citable) accession number: A5IM12
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: June 26, 2007
Last modified: October 10, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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