Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 72 (08 May 2019)
Sequence version 1 (12 Jun 2007)
Previous versions | rss
Help videoAdd a publicationFeedback
Protein
Submitted name:

Candidate beta-glycosidase Glycoside hydrolase family 2

Gene

Fjoh_4075

Organism
Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionGlycosidaseSAAS annotationImported, Hydrolase

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
FJOH376686:G1G8T-4233-MONOMER

Protein family/group databases

Carbohydrate-Active enZymes

More...
CAZyi
CBM57 Carbohydrate-Binding Module Family 57
GH2 Glycoside Hydrolase Family 2

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Candidate beta-glycosidase Glycoside hydrolase family 2Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:Fjoh_4075Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri376686 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeFlavobacterium
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006694 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
376686.Fjoh_4075

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the glycosyl hydrolase 2 family.SAAS annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4107WVP Bacteria
COG3250 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000274580

Identification of Orthologs from Complete Genome Data

More...
OMAi
FGVHIWN

Database of Orthologous Groups

More...
OrthoDBi
1832114at2

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.120.260, 2 hits
2.60.40.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR036156 Beta-gal/glucu_dom_sf
IPR032311 DUF4982
IPR008979 Galactose-bd-like_sf
IPR006101 Glyco_hydro_2
IPR006103 Glyco_hydro_2_cat
IPR006102 Glyco_hydro_2_Ig-like
IPR006104 Glyco_hydro_2_N
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR021720 Malectin_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF16355 DUF4982, 1 hit
PF00703 Glyco_hydro_2, 1 hit
PF02836 Glyco_hydro_2_C, 1 hit
PF02837 Glyco_hydro_2_N, 1 hit
PF11721 Malectin, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00132 GLHYDRLASE2

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49303 SSF49303, 1 hit
SSF49785 SSF49785, 2 hits
SSF51445 SSF51445, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A5FCJ0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNRIVFFIFC FFSSLCFVWS QSKDSGKFRK EISLNSSWET VILDNLPLKE
60 70 80 90 100
EDFVENPKTD SNWQKVSVPH NWDQYYGFRR TKHGNLHGTA WYKKTLKLDK
110 120 130 140 150
KDSSKQHFLY FEGVSSYATV WINGKKVGEH KGGRTTFTLD ITKAVSFDKE
160 170 180 190 200
NIIVVKAAHP SFIADLPWVC GGCSGEWGFS EGSQPMGIFR PVSLVITNNV
210 220 230 240 250
RIQPFGVHIW NDKSVSKQKA ILHTTTEIKN YGTSQRNLTI ENIFLDASGK
260 270 280 290 300
KVAINKSDNK INSGETKEIA QTLPEIQNPK LWSPSNPYLY KLVTSIYENG
310 320 330 340 350
KIIDQLATPY GIRWVSWPVS RDGKDNRFFI NDEPVFINGV CEYEHLIGKS
360 370 380 390 400
HSFSDEMIHS RIEQIKAGGF NAFREAHQPH NLLYQKELDE NGILFWSQFS
410 420 430 440 450
AHIWYDTPEF KENFKTLLRE WIKERRNSPS VVMWGLQNES TIPKEFAEEC
460 470 480 490 500
TQIIREMDPL SASQRIVTTC NGGEGTDWNV VQNWSGTYGG DPLKYHLEMT
510 520 530 540 550
TQLLNGEYGA WRSADLHTEG EFDQKGTLSE NRFSQLMEIK VREAESVKDK
560 570 580 590 600
IAGQFNWLFA SHENPGRVQN GEGFRDIDKV GPVNYKGLFT IWGEPLDAFY
610 620 630 640 650
MYRANYVSNK TNPMVYIVSH TWPSRWEKPG IKNGIDIYSN CDEVELFNDV
660 670 680 690 700
NKTSLGKLKN PGIGQHFQFN NVNIQYNVLY AVGYVNGKAV AKDYIVLNNF
710 720 730 740 750
PKAPSFDALT SEKTDITKAQ KSYNYIYRVN CGGSELTDSA GNTWLTDTHK
760 770 780 790 800
NGQNTWGSLS WTDNFEKLPD FFASQRTTFD PINGTKDPEL FQSFRYGVDK
810 820 830 840 850
LRYEFPAPDG EYLVELYFTE PWYGTGGGLD CKGWRLFDVA INDNVVLKDF
860 870 880 890 900
DIWAEAGHDN ALKKTFKVKS TNGKIVISFP NVKASQAIIS AIAIATKDIH
910 920 930 940 950
ARPALESSKN IQNLVLDSYD KTNRVASWLD INSKQYSDSD VIFTELPSEV
960 970 980 990 1000
FGADYLQFSV NPKNKGSFIA KEESTIYVLV DSKIKTLNGL SDYKKIEEKA
1010 1020 1030 1040 1050
KNSNGISFDV FTKKVKKGEK VLFDNSETIS SIAVVPTYDM GEKDDSRPVV
1060 1070 1080 1090 1100
VIEAEKTKTT GTGIEKGNFK KADYIEFTKK TNNSIEFEVK PGVAGIYLMR
1110 1120 1130 1140 1150
FRFMNRNETP LKVKFKMEDA YGILMRNDTI EFFPSPEKWK ILNTTSGGYI
1160 1170
NAGTYKITIE GDDLKGLMLD NFEFQ
Length:1,175
Mass (Da):133,845
Last modified:June 12, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i386A24E8D605F014
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP000685 Genomic DNA Translation: ABQ07083.1

NCBI Reference Sequences

More...
RefSeqi
WP_012026049.1, NZ_MUGZ01000014.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ABQ07083; ABQ07083; Fjoh_4075

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
31766992

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
fjo:Fjoh_4075

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000685 Genomic DNA Translation: ABQ07083.1
RefSeqiWP_012026049.1, NZ_MUGZ01000014.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi376686.Fjoh_4075

Protein family/group databases

CAZyiCBM57 Carbohydrate-Binding Module Family 57
GH2 Glycoside Hydrolase Family 2

Genome annotation databases

EnsemblBacteriaiABQ07083; ABQ07083; Fjoh_4075
GeneIDi31766992
KEGGifjo:Fjoh_4075

Phylogenomic databases

eggNOGiENOG4107WVP Bacteria
COG3250 LUCA
HOGENOMiHOG000274580
OMAiFGVHIWN
OrthoDBi1832114at2

Enzyme and pathway databases

BioCyciFJOH376686:G1G8T-4233-MONOMER

Family and domain databases

Gene3Di2.60.120.260, 2 hits
2.60.40.10, 2 hits
InterProiView protein in InterPro
IPR036156 Beta-gal/glucu_dom_sf
IPR032311 DUF4982
IPR008979 Galactose-bd-like_sf
IPR006101 Glyco_hydro_2
IPR006103 Glyco_hydro_2_cat
IPR006102 Glyco_hydro_2_Ig-like
IPR006104 Glyco_hydro_2_N
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR021720 Malectin_dom
PfamiView protein in Pfam
PF16355 DUF4982, 1 hit
PF00703 Glyco_hydro_2, 1 hit
PF02836 Glyco_hydro_2_C, 1 hit
PF02837 Glyco_hydro_2_N, 1 hit
PF11721 Malectin, 1 hit
PRINTSiPR00132 GLHYDRLASE2
SUPFAMiSSF49303 SSF49303, 1 hit
SSF49785 SSF49785, 2 hits
SSF51445 SSF51445, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA5FCJ0_FLAJ1
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A5FCJ0
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 8, 2019
This is version 72 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again