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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F57C9.4

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F57C9.4Imported, F57C9.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiF57C9.4c ; CE40970 ; WBGene00019011

PTM / Processingi

Proteomic databases

PeptideAtlasiA5A8Q6

Expressioni

Gene expression databases

BgeeiWBGene00019011 Expressed in 5 organ(s), highest expression level in adult organism

Interactioni

Protein-protein interaction databases

IntActiA5A8Q6, 1 interactor

Structurei

3D structure databases

ProteinModelPortaliA5A8Q6
SMRiA5A8Q6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini393 – 419C2H2-typeInterPro annotationAdd BLAST27
Domaini420 – 447C2H2-typeInterPro annotationAdd BLAST28
Domaini448 – 470C2H2-typeInterPro annotationAdd BLAST23

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili132 – 180Sequence analysisAdd BLAST49

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00390000009909
HOGENOMiHOG000272635

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 2 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A5A8Q6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTSLIDSRVL YESDFSIFNG RLCSLRISAV TNNEEGIEKI RITSPSDATI
60 70 80 90 100
LLDTSISSDE CSSFIEILKE ISTARKSDPS ILGPRIETIH SENEYPFQMV
110 120 130 140 150
IEPINREKHS GKTLPLSHPP PQERCDYVLQ LYAKEKVQHQ SQKTKVEELT
160 170 180 190 200
KQLQQARVDY NTLKQRCDFQ EKEIALLRQI TSSTGSGNRK RSRDDSETTH
210 220 230 240 250
IKKRRCGCGD DGESCGSDCD GMDDDEEDET DTDVQMFRAA TAQLQMAAAG
260 270 280 290 300
RNTQNGNVSS EEGNKNEMPN FMEQLEKFSS VIVKGPNLPS TSTMSTMHIK
310 320 330 340 350
MENGKEQSGP LLLRNSPNDQ NQKVVGVVQY VICQLCPEEE QKSMDLSNQK
360 370 380 390 400
QMEEHFLNKH VDKEKKKCEA CPSDQFQPHN IGQHYRLHTN SVFACEHCGK
410 420 430 440 450
RGRRNFLKTH IRTHTGERPY RCDTCSKSFT DASTLRRHGL VHTGEKKYQC
460 470
PVCGRAIARK DNVKAHIRSH GIQI
Length:474
Mass (Da):53,714
Last modified:June 12, 2007 - v1
Checksum:iDC84995C5D8AFC3D
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
H2KYD4H2KYD4_CAEEL
Uncharacterized protein
CELE_F57C9.4, F57C9.4
856Annotation score:
H2KYD3H2KYD3_CAEEL
Uncharacterized protein
CELE_F57C9.4, F57C9.4
653Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CCD62440.1
RefSeqiNP_001122489.1, NM_001129017.2
UniGeneiCel.18582

Genome annotation databases

EnsemblMetazoaiF57C9.4c; F57C9.4c; WBGene00019011
GeneIDi172100
UCSCiF57C9.4c c. elegans

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CCD62440.1
RefSeqiNP_001122489.1, NM_001129017.2
UniGeneiCel.18582

3D structure databases

ProteinModelPortaliA5A8Q6
SMRiA5A8Q6
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiA5A8Q6, 1 interactor

Proteomic databases

PeptideAtlasiA5A8Q6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF57C9.4c; F57C9.4c; WBGene00019011
GeneIDi172100
UCSCiF57C9.4c c. elegans

Organism-specific databases

CTDi172100
WormBaseiF57C9.4c ; CE40970 ; WBGene00019011

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00390000009909
HOGENOMiHOG000272635

Gene expression databases

BgeeiWBGene00019011 Expressed in 5 organ(s), highest expression level in adult organism

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 2 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA5A8Q6_CAEEL
AccessioniPrimary (citable) accession number: A5A8Q6
Entry historyiIntegrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: November 7, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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