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Protein
Submitted name:

Transcriptional regulator, AsnC family

Gene

Msed_1956

Organism
Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi30 – 49H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, AsnC familyImported
Gene namesi
Ordered Locus Names:Msed_1956Imported
OrganismiMetallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2)Imported
Taxonomic identifieri399549 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeMetallosphaera
Proteomesi
  • UP000000242 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi399549.Msed_1956

Structurei

3D structure databases

ProteinModelPortaliA4YI44
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 72HTH asnC-typeInterPro annotationAdd BLAST62

Phylogenomic databases

eggNOGiarCOG01580 Archaea
COG1522 LUCA
HOGENOMiHOG000115326
OMAiNCYRITG
OrthoDBiPOG093Z0D8J

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR000485 AsnC-type_HTH_dom
IPR011008 Dimeric_a/b-barrel
IPR019888 Tscrpt_reg_AsnC-typ
IPR019887 Tscrpt_reg_AsnC/Lrp_C
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF01037 AsnC_trans_reg, 1 hit
PRINTSiPR00033 HTHASNC
SMARTiView protein in SMART
SM00344 HTH_ASNC, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
SSF54909 SSF54909, 1 hit
PROSITEiView protein in PROSITE
PS50956 HTH_ASNC_2, 1 hit

Sequencei

Sequence statusi: Complete.

A4YI44-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNGGRKKVE LDTVDRRLLI ELLRDSRVSL RRLSEEMSVS PATLHNRLTR
60 70 80 90 100
LVQEGVIKGF TALVDYTKLG YSLSAIIMVK VNGKYLVEFE KEIANTDNIV
110 120 130 140 150
AVYDVVGEYD VVLIAKFRSV EDLDVFLKQL LKNNKVERTY TSIVLNAVKE

DPRVKI
Length:156
Mass (Da):17,760
Last modified:May 29, 2007 - v1
Checksum:i5864F4CD73B1EAB0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000682 Genomic DNA Translation: ABP96096.1
RefSeqiWP_012021883.1, NC_009440.1

Genome annotation databases

EnsemblBacteriaiABP96096; ABP96096; Msed_1956
GeneIDi5103343
KEGGimse:Msed_1956

Similar proteinsi

Entry informationi

Entry nameiA4YI44_METS5
AccessioniPrimary (citable) accession number: A4YI44
Entry historyiIntegrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: March 28, 2018
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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