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Protein

Extracellular exo-alpha-(1->5)-L-arabinofuranosidase

Gene

Sputcn32_2051

Organism
Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.UniRule annotation

Pathwayi: L-arabinan degradation

This protein is involved in the pathway L-arabinan degradation, which is part of Glycan metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway L-arabinan degradation and in Glycan metabolism.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei43Proton acceptorUniRule annotation1
Binding sitei43SubstrateUniRule annotation1
Binding sitei120Substrate; via amide nitrogenUniRule annotation1
Active sitei226Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotationImported, Hydrolase

Enzyme and pathway databases

UniPathwayiUPA00667

Protein family/group databases

CAZyiGH43 Glycoside Hydrolase Family 43

Names & Taxonomyi

Protein namesi
Recommended name:
Extracellular exo-alpha-(1->5)-L-arabinofuranosidaseUniRule annotation (EC:3.2.1.55UniRule annotation)
Gene namesi
Ordered Locus Names:Sputcn32_2051Imported
OrganismiShewanella putrefaciens (strain CN-32 / ATCC BAA-453)Imported
Taxonomic identifieri319224 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000006699 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 36Sequence analysisAdd BLAST36
ChainiPRO_500267628537 – 357Extracellular exo-alpha-(1->5)-L-arabinofuranosidaseSequence analysisAdd BLAST321

Interactioni

Protein-protein interaction databases

STRINGi319224.Sputcn32_2051

Structurei

3D structure databases

ProteinModelPortaliA4Y739
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni160 – 163Substrate bindingUniRule annotation4
Regioni180 – 182Substrate bindingUniRule annotation3

Sequence similaritiesi

Belongs to the glycosyl hydrolase 43 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4107PMW Bacteria
COG3507 LUCA
HOGENOMiHOG000292006
KOiK06113
OMAiGHLWAPD
OrthoDBiPOG091H0Y96

Family and domain databases

Gene3Di2.115.10.20, 1 hit
InterProiView protein in InterPro
IPR006710 Glyco_hydro_43
IPR016840 Glyco_hydro_43_endo_a_Ara-ase
IPR023296 Glyco_hydro_beta-prop_sf
PfamiView protein in Pfam
PF04616 Glyco_hydro_43, 1 hit
PIRSFiPIRSF026534 Endo_alpha-L-arabinosidase, 1 hit
SUPFAMiSSF75005 SSF75005, 1 hit

Sequencei

Sequence statusi: Complete.

A4Y739-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRISITARK HLKRHMNKLH CALLIGLMGS IGSVNAKQVS IHDPVMAKEA
60 70 80 90 100
GNYYLFSTGP GITYYASTDK VHWALAGRVF DTEPTWARGV APDFNGHLWA
110 120 130 140 150
PDIIEHDGYF YLYYSISAFG KNTSAIGVAV NKTLDKNSKD YQWVDKGMVL
160 170 180 190 200
ESIPHRDAWN AIDPNIIVDE KGTPWMSFGS FWQGLKLVKL NQDFISLAKP
210 220 230 240 250
EEWHTLAKLE RPALLNDAEP GPAQIEAPFI YKKDDYYYLF VSYGLCCRAD
260 270 280 290 300
DSTYHLAIGR STSVTGPYLD KEGKDMAQGG GSVLLRGTKA WPGLGHNSVY
310 320 330 340 350
QFEGKDYLVF HAYESADKGL QKLKIAELTW NTQGWPVVDP NALTQYKSVL

VDPIGNK
Length:357
Mass (Da):39,917
Last modified:May 29, 2007 - v1
Checksum:i5868A6E5BAC5072D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000681 Genomic DNA Translation: ABP75772.1

Genome annotation databases

EnsemblBacteriaiABP75772; ABP75772; Sputcn32_2051
KEGGispc:Sputcn32_2051

Similar proteinsi

Entry informationi

Entry nameiA4Y739_SHEPC
AccessioniPrimary (citable) accession number: A4Y739
Entry historyiIntegrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: July 18, 2018
This is version 77 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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