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Entry version 86 (31 Jul 2019)
Sequence version 1 (15 May 2007)
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Protein
Submitted name:

Chitinase

Gene

Mflv_3001

Organism
Mycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionGlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
MGIL350054:G1G8L-3064-MONOMER

Protein family/group databases

Carbohydrate-Active enZymes

More...
CAZyi
CBM2 Carbohydrate-Binding Module Family 2
GH18 Glycoside Hydrolase Family 18
GH5 Glycoside Hydrolase Family 5

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
ChitinaseImported (EC:3.2.1.14Imported, EC:3.2.1.4Imported)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:Mflv_3001Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMycobacterium gilvum (strain PYR-GCK) (Mycobacterium flavescens (strain ATCC 700033 / PYR-GCK))Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri350054 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycolicibacterium
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000232 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

GO - Cellular componenti

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 28Sequence analysisAdd BLAST28
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_500267265929 – 2310Sequence analysisAdd BLAST2282

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
350054.Mflv_3001

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1380 – 1488CBM2InterPro annotationAdd BLAST109
Domaini1604 – 1712CBM2InterPro annotationAdd BLAST109

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni27 – 204DisorderedSequence analysisAdd BLAST178

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi53 – 76PolyampholyteSequence analysisAdd BLAST24
Compositional biasi77 – 114AcidicSequence analysisAdd BLAST38
Compositional biasi116 – 139PolyampholyteSequence analysisAdd BLAST24
Compositional biasi167 – 181PolyampholyteSequence analysisAdd BLAST15
Compositional biasi182 – 204PolarSequence analysisAdd BLAST23

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4106R7G Bacteria
COG2730 LUCA
COG2931 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000224687

KEGG Orthology (KO)

More...
KOi
K01179
K01183

Identification of Orthologs from Complete Genome Data

More...
OMAi
VNDNWGS

Database of Orthologous Groups

More...
OrthoDBi
1691at2

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.2030, 6 hits
2.60.40.290, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR038081 CalX-like_sf
IPR003644 Calx_beta
IPR001919 CBD2
IPR008965 CBM2/CBM3_carb-bd_dom_sf
IPR012291 CBM2_carb-bd_dom_sf
IPR001223 Glyco_hydro18_cat
IPR001547 Glyco_hydro_5
IPR018087 Glyco_hydro_5_CS
IPR017853 Glycoside_hydrolase_SF

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF03160 Calx-beta, 6 hits
PF00553 CBM_2, 2 hits
PF00150 Cellulase, 1 hit
PF00704 Glyco_hydro_18, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00237 Calx_beta, 6 hits
SM00637 CBD_II, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF141072 SSF141072, 6 hits
SSF49384 SSF49384, 2 hits
SSF51445 SSF51445, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51173 CBM2, 2 hits
PS00659 GLYCOSYL_HYDROL_F5, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A4TBD9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGYGRFVGRV GALAVALGIG LAVPAVAAAE PSDDSSAQSG GSDVGGPAKP
60 70 80 90 100
DRVRATESAD RSDDAGEPAG SDRDSDGPTD DSEDPEIDSG DREPLDEESD
110 120 130 140 150
PVSDVEDPSV EDVPDATDSE VSRRDGDSAE PRPENDRETP AAGPTEPSAE
160 170 180 190 200
PDDAAIAVSD RPADAAEPVA PSDDRGMHRA TSADQDVQTL TVSSTPARTS
210 220 230 240 250
GQTATVSTGL TDIVTTFLRV LGIGSSAGDG SAPLPVYEVV TAVLGAIRRE
260 270 280 290 300
MDRLFANNGP SAVLGPTSQT APGVVTGTVI ASDPEGDDLV YSVVEAPTRG
310 320 330 340 350
TVTVDAAGRF TYTAGTSAAA AGADTFVIGV RDAGFHLISV TPTRTQVPVT
360 370 380 390 400
ITFGADGVAT QTISTRAARA TTASAATTAT GTATGTIHHI TTSGPDIVGF
410 420 430 440 450
DPARDKLDLG DVSVHNFIVV DTAEGVGFRN PWSGETTVLQ GVSLSQLTVD
460 470 480 490 500
SFVPIINDHL RQDLSGALAW EQGVTPKANT VYARSHEVGQ IDRVAFTAAT
510 520 530 540 550
DVVDFRYYGT REQLYMSDTP DGVVISNAGT GQALILQGVT TSQLTAKNFV
560 570 580 590 600
FHSAQVREDR LHQQLGIGTV PDSQVLPQGV TYAGTDTWPT TAGTGQPPTG
610 620 630 640 650
QTGTTTKISW QYGSHTALNF DPGRDKLDFG WFKAHEFDVT EVAGSTKIAI
660 670 680 690 700
AGNNQTYTLA GVAIGELTTS NIIALDDSAR TEWSNLIYGA GQTVSQPKLS
710 720 730 740 750
VADAVVSEGN SGTSTLTFTV TMSKASTDTV TVSYSTSNGS ATAAGGDYVP
760 770 780 790 800
AVGTLTFTPG QTSKTVAVTV NGDTLVEFDE QLTLTLSAPV NATIADGTGL
810 820 830 840 850
GTIRNDDVDQ APTTPPTVSI ADLTVTEGNG DHSHFMFVAT LSKPSTETVT
860 870 880 890 900
VRYATSNGTA TAGVDYAATT GTVTFAPGVT TQLVHVDVLG DTVVEQNETF
910 920 930 940 950
FVTLTNPTGA TIGDGVATGT ITDDDTVVTP GTGGVNSGNP GDALWGEAFF
960 970 980 990 1000
APYVDMGAWP VPNLLALAQQ RGISLLTLGF MQATPDGKLA WAGLSALTPD
1010 1020 1030 1040 1050
SDFDQARAIN QSIAALQAAG GDVMISLGGA SGTSLAQWYA AHGLGPQALA
1060 1070 1080 1090 1100
DAYAAVADTY KLNRIDFDIE GSAVAEPASI ALNAQALRLL QQLRPDLEIW
1110 1120 1130 1140 1150
YTLPVLPSGL TADGLNVVRK AIEAGVTLDG VNIMAMDYGE SAAPTSGPNA
1160 1170 1180 1190 1200
KTMGAWAIQA AESTHAQLST LYSGYGQTFA WNQLGVTPMI GVNDVLTEVF
1210 1220 1230 1240 1250
TVADSQALED FARARGLGML SMWSLNRDYP GNIGQATTTT SGTNTPTGGF
1260 1270 1280 1290 1300
SAVFNDYGTV NPTSGPPPAI SIADLTVAEG NGAGAHAMFV VTLDKPSTQT
1310 1320 1330 1340 1350
VTVRYATSNG TAVAGTDYVA ATGTVTFAPG VTSQTVHVGI LGDTVAESAE
1360 1370 1380 1390 1400
TFSVTLSNPT GATIADATAV GAITDDDGVT PTPGANASVK YTVNDNWGSG
1410 1420 1430 1440 1450
FTASVALTAG ASGMNGWTVE FDSPAQISNI WNAEIVSRVG NHYVVRNVSY
1460 1470 1480 1490 1500
NAQVAAGQTV TFGFQASPGG GSATATNFTV NGAATGQPVV VPPKVSIADA
1510 1520 1530 1540 1550
GVVESHSGTK NIVFVLTLDK PATSPVSVAY ATSNGTATAG GDFTAASGVV
1560 1570 1580 1590 1600
TFAAGVTSQQ ISVPVLGDTT VEADETFTVT LSNPSGVTIA DGSAIGTITN
1610 1620 1630 1640 1650
DDVATPTPGN ASATMVVNDN WGSGFTATVT VKAGSSALNG WTVEFDTPAQ
1660 1670 1680 1690 1700
IGNIWNAEIV SRVGNHYVVR NAAWNPKIAA GQTVTFGFQA SPGGGSATAS
1710 1720 1730 1740 1750
NFTVNGQSAP AQPPTVSVAD ASVGESNSGT TQMTFVVTLS RSSTSPVTVA
1760 1770 1780 1790 1800
YATSNGTATA GVDYTAKSGT VTFAPGVLSQ QIQVSVTGDA AVEANETFTL
1810 1820 1830 1840 1850
TLSNPAGATI SDGSALGTIV NDDVAVPANI SLSISDASVT EGAPGVGVAP
1860 1870 1880 1890 1900
GWFSTSGNQI VDSAGRPVQI AGVNWFGMES ETFAPHGLWT RNYKEMMNEM
1910 1920 1930 1940 1950
AALDFNTIRL AYSSEMLHTG AAPNGIDFGK NPDLAGLSAL QIMDKIVGYA
1960 1970 1980 1990 2000
GEIGMRVILD HHRSSKGAGP NSNGLWYEGS YTEAAWIDDW TMLAQRYANT
2010 2020 2030 2040 2050
PTVIGADLHN EPHAGTWGGG GATDWAAAAE RAGNAVLSVN SNWLIFVEGV
2060 2070 2080 2090 2100
ADHQGHSYWW GGNLMGVKDR PIVLNTPNRV VYSPHDYPNS VYAQPWFQTA
2110 2120 2130 2140 2150
NFGAALPDKF EQMWGYIYEQ NIAPIYLGEL GTRLSDPKDV VWYEAITSYL
2160 2170 2180 2190 2200
SGDFDNDGTV DIAAGTEDMS WTFWSWNPNS RDTGGILADD WRTVNTNKMA
2210 2220 2230 2240 2250
YLEAIQFDFD DSSPGVLAQF VVSLAAASTQ VVTVQYATSN QTAGAGSDYA
2260 2270 2280 2290 2300
PATGTLTFQP GETHKTITVV VFADTVMEGN ETFLVTLSSP AGATLADGSG
2310
TGTIRDRTIV
Length:2,310
Mass (Da):238,014
Last modified:May 15, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i01A4F4FB7D9F9074
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP000656 Genomic DNA Translation: ABP45478.1

NCBI Reference Sequences

More...
RefSeqi
WP_011893879.1, NC_009338.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ABP45478; ABP45478; Mflv_3001

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mgi:Mflv_3001

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000656 Genomic DNA Translation: ABP45478.1
RefSeqiWP_011893879.1, NC_009338.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi350054.Mflv_3001

Protein family/group databases

CAZyiCBM2 Carbohydrate-Binding Module Family 2
GH18 Glycoside Hydrolase Family 18
GH5 Glycoside Hydrolase Family 5

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP45478; ABP45478; Mflv_3001
KEGGimgi:Mflv_3001

Phylogenomic databases

eggNOGiENOG4106R7G Bacteria
COG2730 LUCA
COG2931 LUCA
HOGENOMiHOG000224687
KOiK01179
K01183
OMAiVNDNWGS
OrthoDBi1691at2

Enzyme and pathway databases

BioCyciMGIL350054:G1G8L-3064-MONOMER

Family and domain databases

Gene3Di2.60.40.2030, 6 hits
2.60.40.290, 2 hits
InterProiView protein in InterPro
IPR038081 CalX-like_sf
IPR003644 Calx_beta
IPR001919 CBD2
IPR008965 CBM2/CBM3_carb-bd_dom_sf
IPR012291 CBM2_carb-bd_dom_sf
IPR001223 Glyco_hydro18_cat
IPR001547 Glyco_hydro_5
IPR018087 Glyco_hydro_5_CS
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF03160 Calx-beta, 6 hits
PF00553 CBM_2, 2 hits
PF00150 Cellulase, 1 hit
PF00704 Glyco_hydro_18, 1 hit
SMARTiView protein in SMART
SM00237 Calx_beta, 6 hits
SM00637 CBD_II, 2 hits
SUPFAMiSSF141072 SSF141072, 6 hits
SSF49384 SSF49384, 2 hits
SSF51445 SSF51445, 2 hits
PROSITEiView protein in PROSITE
PS51173 CBM2, 2 hits
PS00659 GLYCOSYL_HYDROL_F5, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA4TBD9_MYCGI
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A4TBD9
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: July 31, 2019
This is version 86 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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