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Protein
Submitted name:

Pcdhb10 protein

Gene

Pcdhb10

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • cell adhesion Source: GO_Central
  • homophilic cell adhesion via plasma membrane adhesion molecules Source: InterPro

Keywordsi

Biological processCell adhesionSAAS annotation
LigandCalciumSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Pcdhb10 proteinImported
Gene namesi
Name:Pcdhb10Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:2136745 Pcdhb10

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei686 – 709HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 29Sequence analysisAdd BLAST29
ChainiPRO_500267274230 – 796Sequence analysisAdd BLAST767

Expressioni

Gene expression databases

GenevisibleiA4QMV0 MM

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini154 – 239CAInterPro annotationAdd BLAST86
Domaini263 – 343CAInterPro annotationAdd BLAST81
Domaini366 – 447CAInterPro annotationAdd BLAST82
Domaini471 – 557CAInterPro annotationAdd BLAST87
Domaini587 – 668CAInterPro annotationAdd BLAST82

Keywords - Domaini

RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3594 Eukaryota
ENOG410XQHI LUCA
HOVERGENiHBG054878
OMAiCRATEPC

Family and domain databases

InterProiView protein in InterPro
IPR002126 Cadherin-like_dom
IPR015919 Cadherin-like_sf
IPR032455 Cadherin_C
IPR020894 Cadherin_CS
IPR013164 Cadherin_N
IPR030730 PCDHB5
PANTHERiPTHR24028:SF90 PTHR24028:SF90, 1 hit
PfamiView protein in Pfam
PF00028 Cadherin, 5 hits
PF08266 Cadherin_2, 1 hit
PF16492 Cadherin_C_2, 1 hit
PRINTSiPR00205 CADHERIN
SMARTiView protein in SMART
SM00112 CA, 5 hits
SUPFAMiSSF49313 SSF49313, 6 hits
PROSITEiView protein in PROSITE
PS00232 CADHERIN_1, 4 hits

Sequencei

Sequence statusi: Fragment.

A4QMV0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
EMTLAKTPEN RQVLFFTILL LLWKSCADAI IYSIPEETES GYLVANLAKD
60 70 80 90 100
LGLRVGELAI RGARIHYKGN KELLQLDAET GNLFLKEKPD REVLCRATEP
110 120 130 140 150
CVLHFQIILE NPVQFFQTEL QLTDINDHSP EFPDRKMLLK IPESAQPGTT
160 170 180 190 200
FPLKAAQDPD IGSNAVQNYT VSPNLHFHVV TLSRSDGRKY PELVLDRALD
210 220 230 240 250
REEQPELTLI LTALDGGAPP RSGTTEVHIE VVDINDNAPQ FIQSLYEVQI
260 270 280 290 300
LENSPLDALV ATVSARDLDA GIYGKVAYSL FQDDGISQPF VIDEITGEIR
310 320 330 340 350
LKGALDFEAT PYYNMEIVAT DPGGFSGKCT VVIQVVDVND NAPKLTISSL
360 370 380 390 400
NSSIPENAPE TVVAVFSVSD PDSGENGRMV CSIQNELPFL LKSTFENYYT
410 420 430 440 450
LVTEGTLDRE SKAEYNITIS VTDLGTPRLT TQHTITVQVS DINDNAPTFT
460 470 480 490 500
RTSYTMFIRE NNSPALHIGT ISATDSDAGS NAHITYSLLP PHDPQLTLTS
510 520 530 540 550
LVSINEDNGQ LFALRALDYE ALRAFEFHVR ATDRGSPALS SQALVLVVVL
560 570 580 590 600
DDNDNEPFVL YPLQNSSAPC KELVPRAAEA GYLVTKVVAV DRDSGQNAWL
610 620 630 640 650
SFQLLKATEP GLFSVWAHNG EVRTTRLLSE RDAPKHRLLL VVKDNGDPPR
660 670 680 690 700
SASVTLHVLL VDGFSQPYLP LSEVVQDPAQ EGDDALTLYL VIALASVSSL
710 720 730 740 750
FLISVLLFVG MKLCKRARSP SLGVCSVPEG HFPGHLVDVS GTGTLSQSYQ
760 770 780 790
YEVCLSGDSG TGEFKFLKPM ISNLMVQDPE REVKESPHCR DSFVFS
Length:796
Mass (Da):87,399
Last modified:May 15, 2007 - v1
Checksum:iFD796EFD058C9942
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC112397 mRNA Translation: AAI12398.1
UniGeneiMm.115996

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC112397 mRNA Translation: AAI12398.1
UniGeneiMm.115996

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:2136745 Pcdhb10

Phylogenomic databases

eggNOGiKOG3594 Eukaryota
ENOG410XQHI LUCA
HOVERGENiHBG054878
OMAiCRATEPC

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

GenevisibleiA4QMV0 MM

Family and domain databases

InterProiView protein in InterPro
IPR002126 Cadherin-like_dom
IPR015919 Cadherin-like_sf
IPR032455 Cadherin_C
IPR020894 Cadherin_CS
IPR013164 Cadherin_N
IPR030730 PCDHB5
PANTHERiPTHR24028:SF90 PTHR24028:SF90, 1 hit
PfamiView protein in Pfam
PF00028 Cadherin, 5 hits
PF08266 Cadherin_2, 1 hit
PF16492 Cadherin_C_2, 1 hit
PRINTSiPR00205 CADHERIN
SMARTiView protein in SMART
SM00112 CA, 5 hits
SUPFAMiSSF49313 SSF49313, 6 hits
PROSITEiView protein in PROSITE
PS00232 CADHERIN_1, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA4QMV0_MOUSE
AccessioniPrimary (citable) accession number: A4QMV0
Entry historyiIntegrated into UniProtKB/TrEMBL: May 15, 2007
Last sequence update: May 15, 2007
Last modified: November 7, 2018
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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