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Entry version 41 (07 Nov 2018)
Sequence version 2 (05 Apr 2011)
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Protein
Submitted name:

Uncharacterized protein

Gene

LINJ_34_2360

Organism
Leishmania infantum
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:LINJ_34_2360Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiLeishmania infantumImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri5671 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeLeishmaniinaeLeishmania
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000008153 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 34

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili180 – 221Sequence analysisAdd BLAST42
Coiled coili397 – 484Sequence analysisAdd BLAST88
Coiled coili506 – 529Sequence analysisAdd BLAST24
Coiled coili656 – 697Sequence analysisAdd BLAST42
Coiled coili828 – 876Sequence analysisAdd BLAST49
Coiled coili922 – 959Sequence analysisAdd BLAST38
Coiled coili1005 – 1046Sequence analysisAdd BLAST42
Coiled coili1177 – 1225Sequence analysisAdd BLAST49
Coiled coili1271 – 1308Sequence analysisAdd BLAST38
Coiled coili1354 – 1391Sequence analysisAdd BLAST38
Coiled coili1437 – 1474Sequence analysisAdd BLAST38
Coiled coili1520 – 1557Sequence analysisAdd BLAST38
Coiled coili1603 – 1640Sequence analysisAdd BLAST38
Coiled coili1686 – 1723Sequence analysisAdd BLAST38
Coiled coili1769 – 1806Sequence analysisAdd BLAST38

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
A4IA29

Identification of Orthologs from Complete Genome Data

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OMAi
FRAKRHA

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Fragment.

A4IA29-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAHLPLEGSV VCYEFLDAKR KWLWGVGAVT HSDDRVCVIS QWMGAPVDKA
60 70 80 90 100
MTAKLESEAA SSKAEAKTHQ DRLLAIRERI ESQSCGTSKE EKERTSEELS
110 120 130 140 150
ECLVLIGKHR NRSRSLLADL EIIKGPSTVQ VKCQQFTPAS SSIAILRSSI
160 170 180 190 200
LRVISHVTTP SLVLSSEEVE SIEKAVTHTH SQLNSELHKL RATVEATEIE
210 220 230 240 250
SNELRDQIRN LEEQLKRVKT TFEPVRISDG GESGSAFPEK LREHDLLSLR
260 270 280 290 300
GAWDSSTALV MTEHTIKFPW DDGDTLLHHK PEETKSVFAA EAAFACCVPI
310 320 330 340 350
QCVTNPKMTT HGKHLSAEFS VSHPETVTTK EIDQRLASYA FPSMHLLHEE
360 370 380 390 400
PLGVKTGLDR AIEGLEHALG IPEGKHEGLY FDEFMENMPD TTFSNDKDAY
410 420 430 440 450
ESEIGDLLML LDKLNNENRS LQYTLDKSAA ELKRQVSEAQ KDHDALNTEI
460 470 480 490 500
ARLRNIVSKL KDLAEQQETE LVRSRVQTQR AEEARFHYNL APPANDSQDA
510 520 530 540 550
EYAVTMQEYK DQKEATDNAQ RALVEEKAKA EQMHHLLKMH EQQSAQNAKR
560 570 580 590 600
LRSLQDAFAA ETQQTAENFC ALECELIDVL LQFKASQALT QALHHINSQQ
610 620 630 640 650
QAELFSFRAR RNAALEARDA DGTLPVPARP VPAGEAAERA LEPQQIADEP
660 670 680 690 700
LYAVTLEELE QAREDAARGV AAIEDNAAAL ESELLDVLAE LKAVKGENAA
710 720 730 740 750
LRAVCEMKDA AVADLEKHDV RANNSDKAKP QTTSRHTKVF EGEEWGAVVE
760 770 780 790 800
TKPHALHDAF VTDVCAACRV CRDDLSEIAF ALGSLQASVS VTHNSDISCD
810 820 830 840 850
DIAKLVEEYH YPNVWALYAK RLAPKDGLDE AKDAISDLQL ALAAKEEDAA
860 870 880 890 900
RVAEKLHEER AEAERLAKEV AAFRARRNAA LEARDADGTL PVPARPVPAG
910 920 930 940 950
EAAERALEPQ QIADEPLYAV TLEEYLGKDA AVEQLAAELE EQRAEAERLA
960 970 980 990 1000
KEVAAFRARR NAALEARDAD GTLPVPARPV PAGEAAERAL EPQQIADEPL
1010 1020 1030 1040 1050
YAVTLEELEQ AREDAARGVA AIEDNAAALE SELLDVLAEL KAVKGENAAL
1060 1070 1080 1090 1100
RAVCEMKDAA VADLEKHDVR ANNSDKAKPQ TTSRHTKVFE GEEWGAVVET
1110 1120 1130 1140 1150
KPHALHDAFV TDVCAACRVC RDDLSEIAFA LGSLQASVSV THNSDISCDD
1160 1170 1180 1190 1200
IAKLVEEYHY PNVWALYAKR LAPKDGLDEA KDAISDLQLA LAAKEEDAAR
1210 1220 1230 1240 1250
VAEKLHEERA EAERLAKEVA AFRARRNAAL EARDADGTLP VPARPVPAGE
1260 1270 1280 1290 1300
AAERALEPQQ IADEPLYAVT LEEYLGKDAA VEQLAAELEE QRAEAERLAK
1310 1320 1330 1340 1350
EVAAFRARRN AALEARDADG TLPVPARPVP AGEAAERALE PQQIADEPLY
1360 1370 1380 1390 1400
AVTLEEYLGK EAAVEQLVAE LEEQRAEAER LAKEVAAFRA RRNAALEARD
1410 1420 1430 1440 1450
ADGTLPVPAR PVPAGEAAER ALEPQQIADE PLYAVTLEEY LGKDAAVEQL
1460 1470 1480 1490 1500
AAELEEQRAE AERLAKEVAA FRARRNAALE ARDADGTLPV PARPVPAGEA
1510 1520 1530 1540 1550
AERALEPQQI ADEPLYAVTL EEYLGKDAAV EQLAAELEEQ RAEAERLAKE
1560 1570 1580 1590 1600
VAAFRARRNA ALEARDADGT LPVPARPVPA GEAAERALEP QQIADEPLYA
1610 1620 1630 1640 1650
VTLEEYLGKD AAVEQLAAEL EEQRAEAERL AKEVAAFRAR RNAALEARDA
1660 1670 1680 1690 1700
DGTLPMPARP VPAGEAAERA LEPQQIADEP LYAVTLEEYL GKDAAVEQLV
1710 1720 1730 1740 1750
AELEEQRAEA ERLAKEVAAF RARRNAALEA RDADGTLPVP ARPVPAGEAA
1760 1770 1780 1790 1800
ERALEPQQIA DEPLYAVTLE EYLGKDAAVE QLVAELEEQR AEAERLAKEV
1810 1820
AAFRARRNAT VEARDADGTL PVP
Length:1,823
Mass (Da):199,616
Last modified:April 5, 2011 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i6021A8BCD2647104
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section is used for sequence fragments to indicate that the residue at the extremity of the sequence is not the actual terminal residue in the complete protein sequence.<p><a href='/help/non_ter' target='_top'>More...</a></p>Non-terminal residuei1823Imported1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
FR796466 Genomic DNA Translation: CAM71685.2

NCBI Reference Sequences

More...
RefSeqi
XP_001468598.2, XM_001468561.2

Genome annotation databases

Ensembl protists genome annotation project

More...
EnsemblProtistsi
CAM71685; CAM71685; LINJ_34_2360

GeneDB pathogen genome database from Sanger Institute

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GeneDBi
LinJ.34.2360:pep

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
5072677

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
lif:LINJ_34_2360

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FR796466 Genomic DNA Translation: CAM71685.2
RefSeqiXP_001468598.2, XM_001468561.2

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiCAM71685; CAM71685; LINJ_34_2360
GeneDBiLinJ.34.2360:pep
GeneIDi5072677
KEGGilif:LINJ_34_2360

Phylogenomic databases

InParanoidiA4IA29
OMAiFRAKRHA

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA4IA29_LEIIN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A4IA29
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2007
Last sequence update: April 5, 2011
Last modified: November 7, 2018
This is version 41 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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