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Protein
Submitted name:

SNARE protein Ykt6

Gene

YKT6

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
SNARE protein Ykt6Imported
Submitted name:
SNARE protein Ykt6, isoform CRA_aImported
Submitted name:
cDNA, FLJ93006, Homo sapiens SNARE protein Ykt6 (YKT6), mRNAImported
Gene namesi
Name:YKT6Imported
ORF Names:hCG_18297Imported, tcag7.798Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Organism-specific databases

EuPathDBiHostDB:ENSG00000106636.7

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

MembraneSAAS annotation

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA145007308

Expressioni

Gene expression databases

BgeeiENSG00000106636 Expressed in 213 organ(s), highest expression level in esophagus mucosa

Interactioni

Protein-protein interaction databases

IntActiA4D2J0, 1 interactor
A4D2J0, 1 interactor

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 115LonginInterPro annotationAdd BLAST108
Domaini138 – 198V-SNARE coiled-coil homologyInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the synaptobrevin family.SAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0861 Eukaryota
COG5143 LUCA
HOVERGENiHBG088939
KOiK08516
OMAiYPVRPAF
OrthoDBiEOG091G0MPE

Family and domain databases

InterProiView protein in InterPro
IPR011012 Longin-like_dom_sf
IPR010908 Longin_dom
IPR001388 Synaptobrevin
PfamiView protein in Pfam
PF13774 Longin, 1 hit
PF00957 Synaptobrevin, 1 hit
SMARTiView protein in SMART
SM01270 Longin, 1 hit
SUPFAMiSSF64356 SSF64356, 1 hit
PROSITEiView protein in PROSITE
PS50859 LONGIN, 1 hit
PS50892 V_SNARE, 1 hit

Sequencei

Sequence statusi: Complete.

A4D2J0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKLYSLSVLY KGEAKVVLLK AAYDVSSFSF FQRSSVQEFM TFTSQLIVER
60 70 80 90 100
SSKGTRASVK EQDYLCHVYV RNDSLAGVVI ADNEYPSRVA FTLLEKVLDE
110 120 130 140 150
FSKQVDRIDW PVGSPATIHY PALDGHLSRY QNPREADPMT KVQAELDETK
160 170 180 190
IILHNTMESL LERGEKLDDL VSKSEVLGTQ SKAFYKTARK QNSCCAIM
Length:198
Mass (Da):22,418
Last modified:April 3, 2007 - v1
Checksum:i2AB0C12832D1B943
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK312622 mRNA Translation: BAG35508.1
CH236960 Genomic DNA Translation: EAL23763.1
CH471128 Genomic DNA Translation: EAW61111.1
CH471128 Genomic DNA Translation: EAW61112.1
CH471128 Genomic DNA Translation: EAW61113.1
RefSeqiNP_006546.1, NM_006555.3
UniGeneiHs.520794

Genome annotation databases

GeneIDi10652
KEGGihsa:10652

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK312622 mRNA Translation: BAG35508.1
CH236960 Genomic DNA Translation: EAL23763.1
CH471128 Genomic DNA Translation: EAW61111.1
CH471128 Genomic DNA Translation: EAW61112.1
CH471128 Genomic DNA Translation: EAW61113.1
RefSeqiNP_006546.1, NM_006555.3
UniGeneiHs.520794

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiA4D2J0, 1 interactor
A4D2J0, 1 interactor

Protocols and materials databases

DNASUi10652
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10652
KEGGihsa:10652

Organism-specific databases

CTDi10652
EuPathDBiHostDB:ENSG00000106636.7
PharmGKBiPA145007308

Phylogenomic databases

eggNOGiKOG0861 Eukaryota
COG5143 LUCA
HOVERGENiHBG088939
KOiK08516
OMAiYPVRPAF
OrthoDBiEOG091G0MPE

Miscellaneous databases

ChiTaRSiYKT6 human
GenomeRNAii10652

Gene expression databases

BgeeiENSG00000106636 Expressed in 213 organ(s), highest expression level in esophagus mucosa

Family and domain databases

InterProiView protein in InterPro
IPR011012 Longin-like_dom_sf
IPR010908 Longin_dom
IPR001388 Synaptobrevin
PfamiView protein in Pfam
PF13774 Longin, 1 hit
PF00957 Synaptobrevin, 1 hit
SMARTiView protein in SMART
SM01270 Longin, 1 hit
SUPFAMiSSF64356 SSF64356, 1 hit
PROSITEiView protein in PROSITE
PS50859 LONGIN, 1 hit
PS50892 V_SNARE, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA4D2J0_HUMAN
AccessioniPrimary (citable) accession number: A4D2J0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: November 7, 2018
This is version 112 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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