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Protein
Submitted name:

GLoBin related

Gene

glb-5

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi145Iron (heme distal ligand)PROSITE-ProRule annotation1
Metal bindingi177Iron (heme proximal ligand)PROSITE-ProRule annotation1

GO - Molecular functioni

  • heme binding Source: InterPro
  • metal ion binding Source: UniProtKB-KW
  • oxygen carrier activity Source: UniProtKB-KW
  • oxygen sensor activity Source: WormBase

GO - Biological processi

  • detection of oxygen Source: WormBase

Keywordsi

Biological processOxygen transportPROSITE-ProRule annotation, Transport
LigandHemePROSITE-ProRule annotation, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
GLoBin relatedImported
Gene namesi
Name:glb-5Imported
ORF Names:C18C4.1Imported, CELE_C18C4.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC18C4.1b ; CE48282 ; WBGene00015964 ; glb-5
C18C4.1d ; CE48282 ; WBGene00015964 ; glb-5

Expressioni

Gene expression databases

BgeeiWBGene00015964

Interactioni

Protein-protein interaction databases

STRINGi6239.C18C4.1b

Structurei

3D structure databases

ProteinModelPortaliA3RMS5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini104 – 216GLOBINInterPro annotationAdd BLAST113

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili48 – 71Sequence analysisAdd BLAST24

Sequence similaritiesi

Belongs to the globin family.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410JC55 Eukaryota
ENOG41116NV LUCA
HOGENOMiHOG000251639
InParanoidiA3RMS5
OMAiAHHFFYD
OrthoDBiEOG091G08PL

Family and domain databases

Gene3Di1.10.490.10, 2 hits
InterProiView protein in InterPro
IPR000971 Globin
IPR009050 Globin-like_sf
IPR012292 Globin/Proto
SUPFAMiSSF46458 SSF46458, 1 hit
PROSITEiView protein in PROSITE
PS01033 GLOBIN, 1 hit

Sequencei

Sequence statusi: Complete.

A3RMS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNETTVGVGK MYEEFRITQL VNETLTTVIE KVQTNHEKIS TKAKPRPLSA
60 70 80 90 100
INEEIREYDQ LSRELEKDYR RSMRIVDDDF ELARTHWIQL QKSNKQGLAI
110 120 130 140 150
RGCFLTMLEK YPQVRPIWGF GKRIEGRGDE TWKPEIVEDF YFRHHCASLQ
160 170 180 190 200
AALNMIIQNK DDKSGMRRML NEMGAHHFFY DACEPHFEVF QDSLLESMKL
210 220 230 240 250
VLNGGDSLDD DIEQSWICLL QTIRLHMGEG IEIQRANYLT QCLIPKEMEE
260 270 280 290 300
VRANWMQVEN YGFRKAGLLL CQSAFDNYSE LLKTHNLSMT LPIEANKTSD
310 320 330 340 350
SFVALSDQIM QALDKTIQSY TPEEGFLNLI QEIKDFVIKF LVVEVCPPLI
360 370 380 390
RKSFIDGLIH MLCKILSIKH VKEDFLHIWK KVYRVMEQAM VANIVEY
Length:397
Mass (Da):46,389
Last modified:December 20, 2017 - v2
Checksum:i31F68EA102B7A9F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA Translation: CCD65114.2
BX284605 Genomic DNA Translation: CCU83354.1
RefSeqiNP_001122853.1, NM_001129381.1
NP_001294744.1, NM_001307815.1

Genome annotation databases

EnsemblMetazoaiC18C4.1b; C18C4.1b; WBGene00015964
C18C4.1d; C18C4.1d; WBGene00015964
GeneIDi182776
UCSCiC18C4.1b c. elegans

Similar proteinsi

Entry informationi

Entry nameiA3RMS5_CAEEL
AccessioniPrimary (citable) accession number: A3RMS5
Secondary accession number(s): M1ZMJ2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: December 20, 2017
Last modified: June 20, 2018
This is version 89 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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