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Protein
Submitted name:

Uncharacterized protein

Gene

ham-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • DNA-binding transcription factor activity Source: WormBase

GO - Biological processi

  • cell fate determination Source: WormBase
  • cell migration Source: WormBase
  • regulation of neuron differentiation Source: WormBase

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:ham-2Imported
ORF Names:C07A12.1Imported, CELE_C07A12.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiC07A12.1c ; CE39670 ; WBGene00001821 ; ham-2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiWBGene00001821 Expressed in 4 organ(s), highest expression level in multi-cellular organism

Structurei

3D structure databases

SMRiA3RMS3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili256 – 283Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00390000006159
HOGENOMiHOG000251636
OrthoDBiEOG091G0B56

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A3RMS3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MYRVHNITRM FMCRCCNWAF PDKTSLHIHM QSMLKNGTPG EAAVLAKSSD
60 70 80 90 100
VVDSTSESGS PRQSPPFSPD LLMQKRMLQV AANNNNIGSI FPTLLKSPDS
110 120 130 140 150
KSMFPLDLSN MGPSQFLSAW LANNPINTAA LNLAAQQTPS KDSIQSSNIS
160 170 180 190 200
DYDDLEVQTT EEDIKFEVES SDVSPRSVIV KTEPTFKREL EHDADIDVEG
210 220 230 240 250
DDGEPPLKMT IDDKNIHISH DQPSPTVSDS HISGGSSSHS GESLKCFDCQ
260 270 280 290 300
VARGKLVAVE DKCRAYEKTI RELQVQVDFL RKIQPNPMPP VMLPPPMMPM
310 320 330
PSPGPNNLFQ NPAMRMLLNN LIHMNRPSVV P
Length:331
Mass (Da):36,643
Last modified:April 3, 2007 - v1
Checksum:iB1476F4AC5CC779A
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
H2KYH4H2KYH4_CAEEL
Uncharacterized protein
ham-2 C07A12.1, CELE_C07A12.1
392Annotation score:
A3RMS1A3RMS1_CAEEL
Uncharacterized protein
ham-2 C07A12.1, CELE_C07A12.1
390Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA Translation: CCD63273.1
RefSeqiNP_001294827.1, NM_001307898.1
UniGeneiCel.772

Genome annotation databases

EnsemblMetazoaiC07A12.1c; C07A12.1c; WBGene00001821
GeneIDi180727
UCSCiC07A12.1b c. elegans

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA Translation: CCD63273.1
RefSeqiNP_001294827.1, NM_001307898.1
UniGeneiCel.772

3D structure databases

SMRiA3RMS3
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC07A12.1c; C07A12.1c; WBGene00001821
GeneIDi180727
UCSCiC07A12.1b c. elegans

Organism-specific databases

CTDi180727
WormBaseiC07A12.1c ; CE39670 ; WBGene00001821 ; ham-2

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00390000006159
HOGENOMiHOG000251636
OrthoDBiEOG091G0B56

Gene expression databases

BgeeiWBGene00001821 Expressed in 4 organ(s), highest expression level in multi-cellular organism

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiA3RMS3_CAEEL
AccessioniPrimary (citable) accession number: A3RMS3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2007
Last sequence update: April 3, 2007
Last modified: November 7, 2018
This is version 75 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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