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Protein

Salt stress-induced protein

Gene

SALT

Organism
Oryza sativa subsp. indica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandLectin

Names & Taxonomyi

Protein namesi
Recommended name:
Salt stress-induced protein
Short name:
Salt protein
Alternative name(s):
Protein lectin-like
Protein mannose-binding lectin
Gene namesi
Name:SALT
Synonyms:ML
ORF Names:OsI_001780
OrganismiOryza sativa subsp. indica (Rice)
Taxonomic identifieri39946 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000007015 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00003002532 – 145Salt stress-induced proteinAdd BLAST144

Expressioni

Tissue specificityi

Sheaths and roots from mature plants and seedlings.

Inductioni

In response to salt and related osmotic stresses.

Gene expression databases

ExpressionAtlasiA2WPN7 differential

Structurei

Secondary structure

1145
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliA2WPN7
SMRiA2WPN7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 145Jacalin-type lectinPROSITE-ProRule annotationAdd BLAST143
Repeati6 – 15110
Repeati54 – 642Add BLAST11

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni6 – 642 X approximate repeats, Gly-richAdd BLAST59

Keywords - Domaini

Repeat

Phylogenomic databases

OrthoDBiEOG09360QJY

Family and domain databases

CDDicd09612 Jacalin, 1 hit
Gene3Di2.100.10.30, 1 hit
InterProiView protein in InterPro
IPR001229 Jacalin-like_lectin_dom
IPR033734 Jacalin-like_lectin_dom_plant
IPR036404 Jacalin-like_lectin_dom_sf
PfamiView protein in Pfam
PF01419 Jacalin, 1 hit
SMARTiView protein in SMART
SM00915 Jacalin, 1 hit
SUPFAMiSSF51101 SSF51101, 1 hit
PROSITEiView protein in PROSITE
PS51752 JACALIN_LECTIN, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A2WPN7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTLVKIGLWG GNGGSAQDIS VPPKKLLGVT IYSSDAIRSI AFNYIGVDGQ
60 70 80 90 100
EYAIGPWGGG EGTSTEIKLG SSEHIKEISG THGPVYDLAD IVTYLKIVTS
110 120 130 140
ANNTYEAGVP NGKEFSIPLQ DSGHVVGFFG RSGTLIDAIG IYVHP
Length:145
Mass (Da):15,197
Last modified:September 11, 2007 - v2
Checksum:i62DF5CA901D0C86E
GO

Sequence cautioni

The sequence EAY73933 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti8L → P in ABR25535 (Ref. 4) Curated1
Sequence conflicti74H → Q in ABR25535 (Ref. 4) Curated1
Sequence conflicti74H → Q in ABR26121 (Ref. 4) Curated1
Sequence conflicti114E → D in ABR26121 (Ref. 4) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S45168 mRNA Translation: AAB23484.1
Z25811 Genomic DNA Translation: CAA81059.1
CM000126 Genomic DNA Translation: EAY73933.1 Sequence problems.
EF575947 mRNA Translation: ABR25535.1
EF576533 mRNA Translation: ABR26121.1
PIRiS37043

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S45168 mRNA Translation: AAB23484.1
Z25811 Genomic DNA Translation: CAA81059.1
CM000126 Genomic DNA Translation: EAY73933.1 Sequence problems.
EF575947 mRNA Translation: ABR25535.1
EF576533 mRNA Translation: ABR26121.1
PIRiS37043

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5GVYX-ray1.66A/B1-145[»]
ProteinModelPortaliA2WPN7
SMRiA2WPN7
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

OrthoDBiEOG09360QJY

Gene expression databases

ExpressionAtlasiA2WPN7 differential

Family and domain databases

CDDicd09612 Jacalin, 1 hit
Gene3Di2.100.10.30, 1 hit
InterProiView protein in InterPro
IPR001229 Jacalin-like_lectin_dom
IPR033734 Jacalin-like_lectin_dom_plant
IPR036404 Jacalin-like_lectin_dom_sf
PfamiView protein in Pfam
PF01419 Jacalin, 1 hit
SMARTiView protein in SMART
SM00915 Jacalin, 1 hit
SUPFAMiSSF51101 SSF51101, 1 hit
PROSITEiView protein in PROSITE
PS51752 JACALIN_LECTIN, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiSALT_ORYSI
AccessioniPrimary (citable) accession number: A2WPN7
Secondary accession number(s): A6MZW5
, A6N1K1, O04184, O64441, P24120, Q7F204
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: September 11, 2007
Last modified: May 23, 2018
This is version 49 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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