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Protein

Tetratricopeptide repeat protein 38

Gene

ttc38

Organism
Xenopus laevis (African clawed frog)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Tetratricopeptide repeat protein 38
Short name:
TPR repeat protein 38
Gene namesi
Name:ttc38
OrganismiXenopus laevis (African clawed frog)
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-5833300 ttc38

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003215341 – 469Tetratricopeptide repeat protein 38Add BLAST469

Proteomic databases

MaxQBiA2VD82
PRIDEiA2VD82

Structurei

3D structure databases

SMRiA2VD82
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati107 – 140TPR 1Add BLAST34
Repeati179 – 212TPR 2Add BLAST34
Repeati251 – 284TPR 3Add BLAST34

Sequence similaritiesi

Belongs to the TTC38 family.Curated

Keywords - Domaini

Repeat, TPR repeat

Phylogenomic databases

HOVERGENiHBG108613

Family and domain databases

CDDicd05804 StaR_like, 1 hit
Gene3Di1.25.40.10, 1 hit
InterProiView protein in InterPro
IPR011990 TPR-like_helical_dom_sf
IPR033891 TTC38
PANTHERiPTHR16263 PTHR16263, 1 hit
SUPFAMiSSF48452 SSF48452, 1 hit

Sequencei

Sequence statusi: Complete.

A2VD82-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAPLSLRDCK AWQDAGLTLS TTSNEVCKLF DATLIQYATW KNDSTLGGIE
60 70 80 90 100
GCLSRINNTD PNFVMGHVAA NGLELIGTGR SPLVDKELDD ALKTMSDLSK
110 120 130 140 150
SQALTEREKL HVAAVETFAD GNLPKAADLW ERILQSHPTD LLALKFAHDC
160 170 180 190 200
YFYLGEQRQM RDSVARVLPY WKPETPLSSY VKGMYSFGLL ETNFYDQALK
210 220 230 240 250
VAKEALAVER TDSWSVHTIA HVHEMKADLD SGLSFMQETE NNWKGSDMLA
260 270 280 290 300
CHVYWHWALY LIEKGDYEAA LTLYDNHIAP QCFASGSMLD VVDNSSMLYR
310 320 330 340 350
LQMEGVNVGD RWKNLVQITK KHTKDHMLIF NDLHFLMSSL GSKDEDTTRQ
360 370 380 390 400
LVESMQELSK SPGEKQQHSL IKHLGAPLCQ ALIEYNGGNY DKAVDLIYPI
410 420 430 440 450
RYQILKIGGS DAQRDLFNQV LIQAAINSDS THHQNLARVL LMERDIGRPN
460
SPLTQRLIKK WEALHGLLG
Length:469
Mass (Da):52,834
Last modified:March 20, 2007 - v1
Checksum:iD693492546849C75
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC129593 mRNA Translation: AAI29594.1
RefSeqiNP_001091346.1, NM_001097877.1
UniGeneiXl.48596

Genome annotation databases

GeneIDi100037185
KEGGixla:100037185

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC129593 mRNA Translation: AAI29594.1
RefSeqiNP_001091346.1, NM_001097877.1
UniGeneiXl.48596

3D structure databases

SMRiA2VD82
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiA2VD82
PRIDEiA2VD82

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100037185
KEGGixla:100037185

Organism-specific databases

CTDi100037185
XenbaseiXB-GENE-5833300 ttc38

Phylogenomic databases

HOVERGENiHBG108613

Family and domain databases

CDDicd05804 StaR_like, 1 hit
Gene3Di1.25.40.10, 1 hit
InterProiView protein in InterPro
IPR011990 TPR-like_helical_dom_sf
IPR033891 TTC38
PANTHERiPTHR16263 PTHR16263, 1 hit
SUPFAMiSSF48452 SSF48452, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiTTC38_XENLA
AccessioniPrimary (citable) accession number: A2VD82
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: March 20, 2007
Last modified: June 20, 2018
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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