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Protein
Submitted name:

MCG22610

Gene

Rnf39

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
MCG22610Imported
Submitted name:
Ring finger protein 39Imported
Gene namesi
Name:Rnf39Imported
ORF Names:mCG_22610Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 17

Organism-specific databases

MGIiMGI:2156378 Rnf39

PTM / Processingi

Proteomic databases

TopDownProteomicsiA2RT81

Expressioni

Gene expression databases

BgeeiENSMUSG00000036492 Expressed in 98 organ(s), highest expression level in ear

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000037860

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 66RING-typeInterPro annotationAdd BLAST47
Domaini142 – 352B30.2/SPRYInterPro annotationAdd BLAST211

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG2177 Eukaryota
ENOG4111G04 LUCA
GeneTreeiENSGT00760000118993
HOGENOMiHOG000232108
HOVERGENiHBG057890
OMAiRRWLPME
OrthoDBiEOG091G05W2
TreeFamiTF317532

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001870 B30.2/SPRY
IPR003879 Butyrophylin_SPRY
IPR013320 ConA-like_dom_sf
IPR006574 PRY
IPR003877 SPRY_dom
IPR027370 Znf-RING_LisH
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PfamiView protein in Pfam
PF13765 PRY, 1 hit
PF13445 zf-RING_UBOX, 1 hit
PRINTSiPR01407 BUTYPHLNCDUF
SMARTiView protein in SMART
SM00589 PRY, 1 hit
SM00184 RING, 1 hit
SM00449 SPRY, 1 hit
SUPFAMiSSF49899 SSF49899, 1 hit
PROSITEiView protein in PROSITE
PS50188 B302_SPRY, 1 hit
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A2RT81-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEAPELGPGL VERLEQLATC PLCGGPFEDP VLLACEHSFC RACLARCWGA
60 70 80 90 100
PAASGSEAAP PSCPCCGQPC PRRSLRSNVR LAVEVRISRG LREKLAEPGA
110 120 130 140 150
RAGRRRGGRI PTMGCLDPHG EDMRKTWRRF DVPAPKPSNS EEDLPEDYPV
160 170 180 190 200
VKNMLHRLTA DLTLDPRTAH RDLLISSDYR GVSLAPPGTP APLDSPARFD
210 220 230 240 250
QLPAVLGAQG FASGRHCWEV ETAEGASFRD STAQDENAGE SCYAVGAAGE
260 270 280 290 300
SVTRKGLIKL CPSEAIWAVE GRGGRLWALT APEPTLLGGA RPPPQRIRVD
310 320 330 340 350
LDWERGRVAF YDGRSLDLLF AFQAPGPLGE RVFPLLCTCD PRTPLRILPG

EA
Length:352
Mass (Da):38,015
Last modified:March 6, 2007 - v1
Checksum:i9C31E744C2508985
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
G3UXJ0G3UXJ0_MOUSE
Ring finger protein 39
Rnf39
178Annotation score:
G3UYJ8G3UYJ8_MOUSE
Ring finger protein 39
Rnf39
114Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR956641 Genomic DNA No translation available.
BC132405 mRNA Translation: AAI32406.1
BC145677 mRNA Translation: AAI45678.1
CH466559 Genomic DNA Translation: EDL23311.1
RefSeqiNP_001093102.1, NM_001099632.1
UniGeneiMm.105324

Genome annotation databases

EnsembliENSMUST00000040498; ENSMUSP00000037860; ENSMUSG00000036492
GeneIDi386454
KEGGimmu:386454
UCSCiuc008clm.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR956641 Genomic DNA No translation available.
BC132405 mRNA Translation: AAI32406.1
BC145677 mRNA Translation: AAI45678.1
CH466559 Genomic DNA Translation: EDL23311.1
RefSeqiNP_001093102.1, NM_001099632.1
UniGeneiMm.105324

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000037860

Proteomic databases

TopDownProteomicsiA2RT81

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000040498; ENSMUSP00000037860; ENSMUSG00000036492
GeneIDi386454
KEGGimmu:386454
UCSCiuc008clm.1 mouse

Organism-specific databases

CTDi80352
MGIiMGI:2156378 Rnf39

Phylogenomic databases

eggNOGiKOG2177 Eukaryota
ENOG4111G04 LUCA
GeneTreeiENSGT00760000118993
HOGENOMiHOG000232108
HOVERGENiHBG057890
OMAiRRWLPME
OrthoDBiEOG091G05W2
TreeFamiTF317532

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000036492 Expressed in 98 organ(s), highest expression level in ear

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001870 B30.2/SPRY
IPR003879 Butyrophylin_SPRY
IPR013320 ConA-like_dom_sf
IPR006574 PRY
IPR003877 SPRY_dom
IPR027370 Znf-RING_LisH
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PfamiView protein in Pfam
PF13765 PRY, 1 hit
PF13445 zf-RING_UBOX, 1 hit
PRINTSiPR01407 BUTYPHLNCDUF
SMARTiView protein in SMART
SM00589 PRY, 1 hit
SM00184 RING, 1 hit
SM00449 SPRY, 1 hit
SUPFAMiSSF49899 SSF49899, 1 hit
PROSITEiView protein in PROSITE
PS50188 B302_SPRY, 1 hit
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA2RT81_MOUSE
AccessioniPrimary (citable) accession number: A2RT81
Entry historyiIntegrated into UniProtKB/TrEMBL: March 6, 2007
Last sequence update: March 6, 2007
Last modified: September 12, 2018
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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