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Protein

40S ribosomal protein S4

Gene

TVAG_335480

Organism
Trichomonas vaginalis
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • rRNA binding Source: UniProtKB-UniRule
  • structural constituent of ribosome Source: GO_Central

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S4UniRule annotation
Gene namesi
ORF Names:TVAG_335480Imported
OrganismiTrichomonas vaginalisImported
Taxonomic identifieri5722 [NCBI]
Taxonomic lineageiEukaryotaParabasaliaTrichomonadidaTrichomonadidaeTrichomonas
Proteomesi
  • UP000001542 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiTrichDB:TVAG_335480

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi412133.XP_001310418.1

Structurei

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini42 – 102S4 RNA-bindingInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS4 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0378 Eukaryota
COG1471 LUCA
InParanoidiA2FC75
KOiK02987

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di2.30.30.30, 1 hit
2.40.50.740, 1 hit
HAMAPiMF_00485 Ribosomal_S4e, 1 hit
InterProiView protein in InterPro
IPR032277 40S_S4_C
IPR005824 KOW
IPR014722 Rib_L2_dom2
IPR000876 Ribosomal_S4e
IPR013845 Ribosomal_S4e_central_region
IPR038237 Ribosomal_S4e_central_sf
IPR013843 Ribosomal_S4e_N
IPR002942 S4_RNA-bd
PANTHERiPTHR11581 PTHR11581, 1 hit
PfamiView protein in Pfam
PF16121 40S_S4_C, 1 hit
PF00900 Ribosomal_S4e, 1 hit
PF08071 RS4NT, 1 hit
PF01479 S4, 1 hit
PIRSFiPIRSF002116 Ribosomal_S4, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667 Ribosomal_S4e_central, 1 hit
SMARTiView protein in SMART
SM00739 KOW, 1 hit
PROSITEiView protein in PROSITE
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

A2FC75-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPRCQRFHLK RLTAPHHWLL AKSAGKFASH PSTGPHKLRE CLPINIFLRD
60 70 80 90 100
RLKYALTAKE AVAIVKRRLV KVDGKVRTNY RYPTGLMDVI GLGKSNELFR
110 120 130 140 150
IIYDCKGRFC VHHIEAKEAS FKLLRVNQFK IGAKGIPHVV THDGRTISYV
160 170 180 190 200
DPSVRVHDAL KFNIKTGEVE SVIKFKVGDV AMVTAGGNVG RVGTIQKIEK
210 220 230 240 250
QMASFDIVHL KDTSGAVFAT RIMNVFVIGE NEHPLISLPA REGVRPSILE

GINQE
Length:255
Mass (Da):28,536
Last modified:February 20, 2007 - v1
Checksum:iBB30024F434337E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS113713 Genomic DNA Translation: EAX97488.1
RefSeqiXP_001310418.1, XM_001310417.1

Genome annotation databases

EnsemblProtistsiEAX97488; EAX97488; TVAG_335480
GeneIDi4755273
KEGGitva:TVAG_335480

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS113713 Genomic DNA Translation: EAX97488.1
RefSeqiXP_001310418.1, XM_001310417.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5XYIelectron microscopy3.35E1-255[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi412133.XP_001310418.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiEAX97488; EAX97488; TVAG_335480
GeneIDi4755273
KEGGitva:TVAG_335480

Organism-specific databases

EuPathDBiTrichDB:TVAG_335480

Phylogenomic databases

eggNOGiKOG0378 Eukaryota
COG1471 LUCA
InParanoidiA2FC75
KOiK02987

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di2.30.30.30, 1 hit
2.40.50.740, 1 hit
HAMAPiMF_00485 Ribosomal_S4e, 1 hit
InterProiView protein in InterPro
IPR032277 40S_S4_C
IPR005824 KOW
IPR014722 Rib_L2_dom2
IPR000876 Ribosomal_S4e
IPR013845 Ribosomal_S4e_central_region
IPR038237 Ribosomal_S4e_central_sf
IPR013843 Ribosomal_S4e_N
IPR002942 S4_RNA-bd
PANTHERiPTHR11581 PTHR11581, 1 hit
PfamiView protein in Pfam
PF16121 40S_S4_C, 1 hit
PF00900 Ribosomal_S4e, 1 hit
PF08071 RS4NT, 1 hit
PF01479 S4, 1 hit
PIRSFiPIRSF002116 Ribosomal_S4, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667 Ribosomal_S4e_central, 1 hit
SMARTiView protein in SMART
SM00739 KOW, 1 hit
PROSITEiView protein in PROSITE
PS50889 S4, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA2FC75_TRIVA
AccessioniPrimary (citable) accession number: A2FC75
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: November 7, 2018
This is version 53 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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