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Protein

40S ribosomal protein S4

Gene

TVAG_098450

Organism
Trichomonas vaginalis
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S4UniRule annotation
Gene namesi
ORF Names:TVAG_098450Imported
OrganismiTrichomonas vaginalisImported
Taxonomic identifieri5722 [NCBI]
Taxonomic lineageiEukaryotaParabasaliaTrichomonadidaTrichomonadidaeTrichomonas
Proteomesi
  • UP000001542 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiTrichDB:TVAG_098450

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi412133.XP_001321933.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini56 – 116S4 RNA-bindingInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS4 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0378 Eukaryota
COG1471 LUCA
InParanoidiA2ECC6
KOiK02987

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di2.30.30.30, 1 hit
2.40.50.740, 1 hit
HAMAPiMF_00485 Ribosomal_S4e, 1 hit
InterProiView protein in InterPro
IPR032277 40S_S4_C
IPR005824 KOW
IPR014722 Rib_L2_dom2
IPR000876 Ribosomal_S4e
IPR013845 Ribosomal_S4e_central_region
IPR038237 Ribosomal_S4e_central_sf
IPR013843 Ribosomal_S4e_N
IPR002942 S4_RNA-bd
PANTHERiPTHR11581 PTHR11581, 1 hit
PfamiView protein in Pfam
PF16121 40S_S4_C, 1 hit
PF00900 Ribosomal_S4e, 1 hit
PF08071 RS4NT, 1 hit
PF01479 S4, 1 hit
PIRSFiPIRSF002116 Ribosomal_S4, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667 Ribosomal_S4e_central, 1 hit
SMARTiView protein in SMART
SM00739 KOW, 1 hit
PROSITEiView protein in PROSITE
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

A2ECC6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRKKSFSWS VLFLMPRCQR FHLKRLTAPH HWLLAKSAGK FASHPSTGPH
60 70 80 90 100
KLRECLPINI FLRDRLKYAL TAKEAVAIVK RRLVKVDGKV RTNYRYPTGL
110 120 130 140 150
MDVIELGKSN ELFRIIYDCK GRFCVHHIEA KEASFKLLRV NQFKIGAKGI
160 170 180 190 200
PHVVTHDGRT ISYVDPSVRV HDALKFNIKT GEVESVIKFK VGDVAMVTAG
210 220 230 240 250
GNVGRVGTIQ KIEKQMASFD IVHLKDTSGA VFATRIMNVF VIGENEHPLI
260
SLPAREGVRP SILEGINQE
Length:269
Mass (Da):30,376
Last modified:February 20, 2007 - v1
Checksum:iB26AEFAA20CD75A3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS113352 Genomic DNA Translation: EAY09710.1
RefSeqiXP_001321933.1, XM_001321898.1

Genome annotation databases

EnsemblProtistsiEAY09710; EAY09710; TVAG_098450
GeneIDi4767633
KEGGitva:TVAG_098450

Similar proteinsi

Entry informationi

Entry nameiA2ECC6_TRIVA
AccessioniPrimary (citable) accession number: A2ECC6
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: May 23, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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