Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

UniProtKB - A2CEB4 (A2CEB4_DANRE)

Entry version 80 (16 Jan 2019)
Sequence version 1 (20 Feb 2007)
Previous versions | rss
Other tutorials and videosHelp videoFeedback
Protein
Submitted name:

Golgin A3

Gene

golga3

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

View the complete GO annotation on QuickGO ...

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Golgin A3Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:golga3Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri7955 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000437 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Zebrafish Information Network genome database

More...ZFINi		ZDB-GENE-060526-252 golga3

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		A2CEB4

PeptideAtlas

More...PeptideAtlasi		A2CEB4

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSDARG00000062511 Expressed in 18 organ(s), highest expression level in female gonad

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		7955.ENSDARP00000115821

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili138 – 172Sequence analysisAdd BLAST35
Coiled coili416 – 464Sequence analysisAdd BLAST49
Coiled coili500 – 583Sequence analysisAdd BLAST84
Coiled coili676 – 713Sequence analysisAdd BLAST38
Coiled coili721 – 783Sequence analysisAdd BLAST63
Coiled coili791 – 982Sequence analysisAdd BLAST192
Coiled coili1012 – 1130Sequence analysisAdd BLAST119
Coiled coili1145 – 1211Sequence analysisAdd BLAST67
Coiled coili1226 – 1288Sequence analysisAdd BLAST63
Coiled coili1293 – 1323Sequence analysisAdd BLAST31
Coiled coili1328 – 1355Sequence analysisAdd BLAST28
Coiled coili1363 – 1397Sequence analysisAdd BLAST35
Coiled coili1433 – 1460Sequence analysisAdd BLAST28

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG410IFW4 Eukaryota
ENOG410YGSW LUCA

Ensembl GeneTree

More...GeneTreei		ENSGT00940000154088

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000112752

The HOVERGEN Database of Homologous Vertebrate Genes

More...HOVERGENi		HBG051753

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		A2CEB4

Database of Orthologous Groups

More...OrthoDBi		87408at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		A2CEB4

TreeFam database of animal gene trees

More...TreeFami		TF332014

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR033288 Golga3

The PANTHER Classification System

More...PANTHERi		PTHR18902:SF26 PTHR18902:SF26, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A2CEB4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MENGNNGMVS IEAKPPQHPD AQHCKNPNSN TVESLKPERS LVTEKIPNGH 
        60         70         80         90        100
VKAELLPNGE AMVEGQDVGG GSTPPSATPS PGSRLSDSSP STELDPGVVS 
       110        120        130        140        150
FPDSLERSEG SVHTGDALQS LRLSIPMQET ELSSTDPCVE MENEEKIRQE 
       160        170        180        190        200
ARRRLEEQLK QYRAQRHTER TRRSTPKSRP FSTLDPELML HPEGLPRANT 
       210        220        230        240        250
VAMTKEYSFL RTSVPRGPKL GSLGIPSSRE KKSKSSRSSK IHSLADYKTP 
       260        270        280        290        300
ESEGSGGAVS ASADSSFTSL HSTISSVSTV SEISISSEAN NHSESSQLIR 
       310        320        330        340        350
DNISEVDGSE SGFRADGNDS DSSSYSSVST TGTYNMLSAI VNRPKAPYTV 
       360        370        380        390        400
EGREIAAEAM GHFPSLQEVL QAATEERHME ELEQDREGSV EPRSRRDSFS 
       410        420        430        440        450
SSVSYGSSVM GTHDEMLQVL KEKMRLEGQL ESLSSEASQA LKEKTELQAQ 
       460        470        480        490        500
LATVNAQLKA QVEQTQAGQE RQSTLKTEVT TLRSNCSALE KAMVDLQTNL 
       510        520        530        540        550
EGKNASLASL GNDLEVAEEQ YQRLMVKVEE MQQSLNAKDN TVSELRQQMG 
       560        570        580        590        600
GLQTQLQRVQ SERNALQSRL KTSQAEVDSL QQLRLWYQQQ LNLAQEARVR 
       610        620        630        640        650
LQGEMANMQA GQMTQFGVLE NLKIENVTLS HKLTETNHRS IKEKERIAVQ 
       660        670        680        690        700
LQSIEADMLT QEAAIHQIQE AKTMVEEDLQ HKLEEFEEER EHLLKLANTA 
       710        720        730        740        750
TTLERELEQV KLVLFQKDSQ LESLQREHLE LMKQLTTTQE TLQTKEQALN 
       760        770        780        790        800
QLEARYQELQ VQLEELQTDA SAKEETLQYL QNEKIVLEVA LQAARADKSE 
       810        820        830        840        850
LDEGAEKLGE EVLVASDTLD QLRQEVQVKA TQIEALQHEN GTLKKQAQKL 
       860        870        880        890        900
KEQFMQQKVM VEAYRRDASS KEQLISELKA SKKRLVAEVK DLKQELLKTE 
       910        920        930        940        950
GEKKSAVQEQ ARLQKEVERV QQQMNGLEAH LQSVQTERDQ LDSQLQSLQF 
       960        970        980        990       1000
DQNQLAAVTE ENENLRKRVE QMQNEARTAI SEQKVKMKRL GTDLTSAQKE 
      1010       1020       1030       1040       1050
MKAKHKAYEN AVGILSRRLQ EALAAKETAE AELDKLKAQV ADGGNSQELQ 
      1060       1070       1080       1090       1100
AKVKSLQGEL QAVSQSKAML EKELQEVITL TSTELEEYQE KVLELEDEQL 
      1110       1120       1130       1140       1150
QESRNFKKRI RRLEDANKKL ALELEHEKGK LSGLGKSHSA LREHANILEA 
      1160       1170       1180       1190       1200
ALAKREADLV QLNLQVQAVL KRKEEEDQQM RQLVQTLQTA LEKEKIKVKD 
      1210       1220       1230       1240       1250
LTEQVAEAKL EAAHNRRHYR AAVLELSEIK KDLQAKEELV KALEKEATTL 
      1260       1270       1280       1290       1300
AAQDEKHSEE VSRFREELAD AHTQLQILQK QLDDELNKQP VTNQEVEDLK 
      1310       1320       1330       1340       1350
WEVEQKQREM EAQKQQLEMV EQCHQREMQS QQDMLQTIKV ELEMVQEELN 
      1360       1370       1380       1390       1400
GTRKDKFMLQ AKVGELRNSM KTVLQQNNQL KQDLKNSRLR KQRMDLKGES 
      1410       1420       1430       1440       1450
TPVTPVKIPD CPVPASLLDE LLKPSTSVNK EPLNNLHNCL KQLKQEMDSL 
      1460       1470       1480       1490 
QKQMEEHTVT VTSLASPEDE LQKLGLHDSS ESSNKEDKEE MLPS
Length:1,494
Mass (Da):168,503
Last modified:February 20, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC449520739D448B7
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
CR388061 Genomic DNA No translation available.

NCBI Reference Sequences

More...RefSeqi		NP_001122017.1, NM_001128545.1

UniGene gene-oriented nucleotide sequence clusters

More...UniGenei		Dr.42542

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENSDART00000137022; ENSDARP00000115821; ENSDARG00000062511

Database of genes from NCBI RefSeq genomes

More...GeneIDi		570879

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		dre:570879

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR388061 Genomic DNA No translation available.
RefSeqiNP_001122017.1, NM_001128545.1
UniGeneiDr.42542

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000115821

Proteomic databases

PaxDbiA2CEB4
PeptideAtlasiA2CEB4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000137022; ENSDARP00000115821; ENSDARG00000062511
GeneIDi570879
KEGGidre:570879

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		2802
ZFINiZDB-GENE-060526-252 golga3

Phylogenomic databases

eggNOGiENOG410IFW4 Eukaryota
ENOG410YGSW LUCA
GeneTreeiENSGT00940000154088
HOGENOMiHOG000112752
HOVERGENiHBG051753
InParanoidiA2CEB4
OrthoDBi87408at2759
PhylomeDBiA2CEB4
TreeFamiTF332014

Gene expression databases

BgeeiENSDARG00000062511 Expressed in 18 organ(s), highest expression level in female gonad

Family and domain databases

InterProiView protein in InterPro
IPR033288 Golga3
PANTHERiPTHR18902:SF26 PTHR18902:SF26, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA2CEB4_DANRE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A2CEB4
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: January 16, 2019
This is version 80 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again