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Protein

DNA-directed RNA polymerase subunit H

Gene

rpoH

Organism
Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.UniRule annotation

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferase, Transferase
Biological processTranscription

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-directed RNA polymerase subunit HUniRule annotation (EC:2.7.7.6UniRule annotation)
Gene namesi
Name:rpoHUniRule annotation
Ordered Locus Names:Hbut_1572
OrganismiHyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5)
Taxonomic identifieri415426 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesPyrodictiaceaeHyperthermus
Proteomesi
  • UP000002593 Componenti: Chromosome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymerase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000743851 – 83DNA-directed RNA polymerase subunit HAdd BLAST83

Proteomic databases

PRIDEiA2BN32

Interactioni

Protein-protein interaction databases

STRINGi415426.Hbut_1572

Structurei

3D structure databases

ProteinModelPortaliA2BN32
SMRiA2BN32
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04258 Archaea
COG2012 LUCA
HOGENOMiHOG000109413
KOiK03053
OMAiPKIYHDD
OrthoDBiPOG093Z0M57

Family and domain databases

Gene3Di3.90.940.20, 1 hit
HAMAPiMF_00025 RNApol_RpoH_RPB5, 1 hit
InterProiView protein in InterPro
IPR000783 RNA_pol_subH/Rpb5_C
IPR020608 RNA_pol_subH/Rpb5_CS
IPR035913 RPB5-like
IPR020609 RpoH/RPB5
PfamiView protein in Pfam
PF01191 RNA_pol_Rpb5_C, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005155 RNA_pol_subH/Rpb5_C, 1 hit
SUPFAMiSSF55287 SSF55287, 1 hit
PROSITEiView protein in PROSITE
PS01110 RNA_POL_H_23KD, 1 hit

Sequencei

Sequence statusi: Complete.

A2BN32-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARQKKKFNI LEHELVPKHE VVPPEEAARI IRELGVRPEQ LPWLRATDPV
60 70 80
ARAIGAKPGD IVRIYRKSPT AGEVVVYRYV VGY
Length:83
Mass (Da):9,473
Last modified:February 20, 2007 - v1
Checksum:i3E06F36D5AA58218
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000493 Genomic DNA Translation: ABM81393.1
RefSeqiWP_011822711.1, NC_008818.1

Genome annotation databases

EnsemblBacteriaiABM81393; ABM81393; Hbut_1572
GeneIDi4782374
KEGGihbu:Hbut_1572

Similar proteinsi

Entry informationi

Entry nameiRPOH_HYPBU
AccessioniPrimary (citable) accession number: A2BN32
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: February 20, 2007
Last modified: May 23, 2018
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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