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Protein
Submitted name:

Zinc finger, CCHC domain-containing 8

Gene

zcchc8

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger, CCHC domain-containing 8Imported
Gene namesi
Name:zcchc8Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 5

Organism-specific databases

ZFINiZDB-GENE-060526-6 zcchc8

PTM / Processingi

Proteomic databases

PaxDbiA2BIQ8
PeptideAtlasiA2BIQ8

Expressioni

Gene expression databases

BgeeiENSDARG00000034982 Expressed in 29 organ(s), highest expression level in mature ovarian follicle
ExpressionAtlasiA2BIQ8 baseline

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000112279

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini267 – 319PSPInterPro annotationAdd BLAST53

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili38 – 65Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2673 Eukaryota
ENOG410XPDY LUCA
GeneTreeiENSGT00390000011475
HOVERGENiHBG079371
InParanoidiA2BIQ8
OMAiWLKEAEM
TreeFamiTF321837

Family and domain databases

InterProiView protein in InterPro
IPR006568 PSP_pro-rich
PfamiView protein in Pfam
PF04046 PSP, 1 hit
SMARTiView protein in SMART
SM00581 PSP, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A2BIQ8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAVEFGDTE LFEQFEDKAS ARITDEGGEE EGESSDRLQG LRQTLGECEE
60 70 80 90 100
TIGRLNAENE ELKRKLNILS RPMGITIEDS KTSGPVCQIN YGNNIISRQC
110 120 130 140 150
RNEIEDFIFS LVQKQLHNND REASTPHVVP HASSFVMAES YKVKTSSDSK
160 170 180 190 200
LIKNAFSVIG SVLYFTDFCV DKLGQPLMNE SPQQTEGWEV PKYQQVFGQI
210 220 230 240 250
IALEGQDVEI KQKRPKPCCF NCCSEDHQLR DCPKPKDMAR INEKRKEFSQ
260 270 280 290 300
NNQSNQRYHA EEVEERFAKY KPGIMSQDLL DALGMTTNTL PPFIYRMREL
310 320 330 340 350
GYPPGWLKEA ELENSGLMLY DGSNDGDENN HSQKISYDVS KLVDFPGFNV
360 370 380 390 400
NAPPNIRDDY RSFGSIPMQP QHWKQNFAAF LSNTFPTDSG SSKRPHESDS
410 420 430 440 450
TPQKTKKRKS GSDQTLQASD MEIESDHDMP QMGSDGFQFH PPLPPGTSSI
460 470 480 490 500
GTPPPLPLGT PPSTPPIPKG TPPATPPTNK NPSTHARAQT EGEESEDGLT
510 520 530 540 550
LEELEEQQRL LWAALEKADT TTNSDSDTPV PSSPSVVTSL KFDTEDDGEK
560 570 580 590 600
MEDSIHTFEI KSTPSSPAVS NVCEDEMTDK TNSDGKQEID LQAEMSDIIV
610 620 630 640 650
LDEVYGENGN PDASEAPQKN VQESSSEVAD DIEESGVNKV TFVPHRSRFA
660 670 680 690
AGIIPFEDTP EFTEVAEATG VYLKIRDLLK GSPRNQAKSK K
Length:691
Mass (Da):76,838
Last modified:February 20, 2007 - v1
Checksum:i977DF12452820271
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A2BIQ7A2BIQ7_DANRE
Zinc finger, CCHC domain-containing...
zcchc8
410Annotation score:
X1WDX4X1WDX4_DANRE
Zinc finger, CCHC domain-containing...
zcchc8
692Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX957226 Genomic DNA No translation available.
FQ377613 Genomic DNA No translation available.
RefSeqiXP_005165684.1, XM_005165627.3
UniGeneiDr.17330

Genome annotation databases

EnsembliENSDART00000125781; ENSDARP00000112279; ENSDARG00000034982
GeneIDi553372

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX957226 Genomic DNA No translation available.
FQ377613 Genomic DNA No translation available.
RefSeqiXP_005165684.1, XM_005165627.3
UniGeneiDr.17330

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000112279

Proteomic databases

PaxDbiA2BIQ8
PeptideAtlasiA2BIQ8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000125781; ENSDARP00000112279; ENSDARG00000034982
GeneIDi553372

Organism-specific databases

CTDi55596
ZFINiZDB-GENE-060526-6 zcchc8

Phylogenomic databases

eggNOGiKOG2673 Eukaryota
ENOG410XPDY LUCA
GeneTreeiENSGT00390000011475
HOVERGENiHBG079371
InParanoidiA2BIQ8
OMAiWLKEAEM
TreeFamiTF321837

Gene expression databases

BgeeiENSDARG00000034982 Expressed in 29 organ(s), highest expression level in mature ovarian follicle
ExpressionAtlasiA2BIQ8 baseline

Family and domain databases

InterProiView protein in InterPro
IPR006568 PSP_pro-rich
PfamiView protein in Pfam
PF04046 PSP, 1 hit
SMARTiView protein in SMART
SM00581 PSP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA2BIQ8_DANRE
AccessioniPrimary (citable) accession number: A2BIQ8
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: November 7, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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