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Protein
Submitted name:

Transient receptor potential cation channel, subfamily M, member 3

Gene

trpm3

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-DRE-3295583 TRP channels

Names & Taxonomyi

Protein namesi
Submitted name:
Transient receptor potential cation channel, subfamily M, member 3Imported
Gene namesi
Name:trpm3Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 5

Organism-specific databases

ZFINiZDB-GENE-060531-95 trpm3

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei888 – 904HelicalSequence analysisAdd BLAST17
Transmembranei951 – 969HelicalSequence analysisAdd BLAST19
Transmembranei981 – 999HelicalSequence analysisAdd BLAST19
Transmembranei1020 – 1040HelicalSequence analysisAdd BLAST21
Transmembranei1098 – 1123HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiA2BGS8
PeptideAtlasiA2BGS8

Expressioni

Gene expression databases

BgeeiENSDARG00000039181
ExpressionAtlasiA2BGS8 baseline

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000123466

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini890 – 1132Ion_transInterPro annotationAdd BLAST243
Domaini1224 – 1278TRPM_tetraInterPro annotationAdd BLAST55

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1227 – 1247Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3614 Eukaryota
ENOG410XR5B LUCA
GeneTreeiENSGT00760000119127
HOVERGENiHBG055663
InParanoidiA2BGS8
OMAiNEEPSWK
OrthoDBiEOG091G0DHL
PhylomeDBiA2BGS8
TreeFamiTF314204

Family and domain databases

Gene3Di1.20.5.1010, 1 hit
InterProiView protein in InterPro
IPR005821 Ion_trans_dom
IPR029583 TRPM3
IPR032415 TRPM_tetra
IPR037162 TRPM_tetra_sf
PANTHERiPTHR13800:SF7 PTHR13800:SF7, 2 hits
PfamiView protein in Pfam
PF00520 Ion_trans, 1 hit
PF16519 TRPM_tetra, 1 hit

Sequencei

Sequence statusi: Fragment.

A2BGS8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
AQKSWIERAF SKRECVHIIV STKDHHRCCC GRLIGQHVGL PPSISSNQNE
60 70 80 90 100
KSERVPKNDS LSEKWSISKH TQLSPTDAFG TIEFQGGGHS NKAMYVRVSY
110 120 130 140 150
DTKPDLLLHL MTKEWQLELP KLLISVHGGL QNFELQPKLK QVFGKGLIKA
160 170 180 190 200
AMTTGAWIFT GGVNTGVIRH VGDALKDHAS KSRGKICTIG IAPWGIVENQ
210 220 230 240 250
EDLVGKDVVR PYQTMSNPLS KLTVLNSLHS HFILADNGTT GKYGAEVKLR
260 270 280 290 300
RQLEKHISLQ KINTRIGQGV PVVALIVEGG PNVISIVLEY LRDTPPVPVV
310 320 330 340 350
VCDGSGRASD ILAFGHKYSE EGGIINESLR DQLLVTIQKT FTYSRTQAQH
360 370 380 390 400
LFIILMECMK KKELITVFRM GSEGHQDIDL AILTALLKGA NASAPDQLSL
410 420 430 440 450
ALAWNRVDIA RSQIFIYGQQ WPVGSLEQSM LDALVLDRVD FVKLLIENGV
460 470 480 490 500
SMHRFLTLSR LEELYNTRHG PSNTLYHLVR DVKKGNLPPD YRISLIDIGL
510 520 530 540 550
VIEYLMGGAY RCNYTRKRFR TLYHNLFGPK RPKALKLLGM EDDMPIRRGR
560 570 580 590 600
QKTTRKREEE VDIDLDDPEI NHFPFPFHEL MVWAVLMKRQ KMALFFWQHG
610 620 630 640 650
EEAMAKALVA CKLCKAMAHE ASENDMVDDI SQELNQNSRE FGQLAVELLD
660 670 680 690 700
QSYKQDEQMA MKLLTYELKN WSNATCLQLA VAAKHRDFIA HTCSQMLLTD
710 720 730 740 750
MWMGRLRMRK NSGLKVILGL LLPPSILSLE FKNKDEMSYM PQDQDTYLQE
760 770 780 790 800
KDVDEPEKQA KEKEEEDMEF TVRSYCETQY NSVAMLGNVS SEASRKKQVE
810 820 830 840 850
EVQNRHRLIP LGRKIYEFYN APIVKFWFHT KVHDCHRLIP VGRKIKVQDR
860 870 880 890 900
NLLILVGHKM YEFYNNPFIK FWFCMVNSII YYTKTNCTLA YVGYLMLFNY
910 920 930 940 950
IVLVKMDLWP SPQEWIVIAY IFTNGIEKMR EILMSEPGKL LQKVKVWLQE
960 970 980 990 1000
YWNITDLMAI LIFSIGMVLR LQDPPLMSYG RVIYCVNIIY WYIRLLDIFG
1010 1020 1030 1040 1050
VNKYLGPYVM MIGKMMIDMM YFVIIMLVVL MSFGVARQAI LNPNEDPSWM
1060 1070 1080 1090 1100
LARNIFFMPY WMIYGEVFAD QIDPPCGQNI TTEEGVVMPL PPCKTGAWIV
1110 1120 1130 1140 1150
PAIMACYLLV ANILLVNLLI AVFNNTFFEV KSISNQVWKF QRYQLIMTFH
1160 1170 1180 1190 1200
ERPVLPPPLI IFSHITMVLK HLCCRWRKHD EDERDYGLKL FITEDELKKV
1210 1220 1230 1240 1250
HDFEEQCMEE YFREKDDRFN SSNDERIRVT SERVENMAMR LEEVNEREHF
1260 1270 1280 1290 1300
MKASLQTVDI RLAQMEEMIG RIAVALERVA GMDRGEVNKA RSRTSSDCTD
1310 1320 1330 1340 1350
TNYILRQSSF NSQEGNSYRL QESLEQGGDE SISPTSPTAL APRVRSHSFY
1360 1370 1380 1390 1400
VSHSSKDRSG ADRGEGFFKD KLFSLHRANS SQSVSSGAGP KESKPTPLNT
1410 1420 1430 1440 1450
LSVQQQLRPS SCIDIYVSAS EDVPPTESFL DSVRTVPTLA RDSSLHSEIM
1460 1470 1480 1490 1500
EAVLSGGRDC SGRAGGSERQ SDGTVLFEDS AAADLSLCSA HLLPDSLPPW
1510 1520 1530 1540 1550
DLDPSPPPSA GVLERSKSSR FLSTAGPLFL DEPHLVKSHS LMFTSRGYYG
1560 1570 1580 1590 1600
GMGVQVKAAE YTSITDCIDT RCVSTPYPVP ERSDSPGGSF TFDKPQDLGV
1610 1620 1630 1640 1650
SHPERDAELS HAESDLEEPA EGSGDTCKVG QSSSSGVIGA DLGLGLALGP
1660 1670 1680 1690 1700
FCSPISRLER ANSCSSSEES HSNIYSRKSF SISERMDKGR GSSRNPFQKA
1710 1720 1730
RTGARLEGKT DSLSMRKMAK PSAFRSFDSR HNYT
Length:1,734
Mass (Da):196,524
Last modified:February 20, 2007 - v1
Checksum:iFA8DF29741504CAA
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei1734Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX323080 Genomic DNA No translation available.
BX511001 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSDART00000147188; ENSDARP00000123466; ENSDARG00000039181

Similar proteinsi

Entry informationi

Entry nameiA2BGS8_DANRE
AccessioniPrimary (citable) accession number: A2BGS8
Entry historyiIntegrated into UniProtKB/TrEMBL: February 20, 2007
Last sequence update: February 20, 2007
Last modified: July 18, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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