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UniProtKB - A2BG39 (A2BG39_DANRE)
Protein
Condensin complex subunit 2
Gene
ncaph
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Functioni
Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
UniRule annotationGO - Molecular functioni
- chromatin binding Source: GO_Central
GO - Biological processi
- cell division Source: UniProtKB-KW
- mitotic chromosome condensation Source: GO_Central
- mitotic sister chromatid segregation Source: ZFIN
Keywordsi
Biological process | Cell cycle, Cell division, DNA condensationUniRule annotation, MitosisUniRule annotationARBA annotation |
Names & Taxonomyi
Protein namesi | Recommended name: Condensin complex subunit 2UniRule annotationARBA annotation |
Gene namesi | Name:ncaphImported |
Organismi | Danio rerio (Zebrafish) (Brachydanio rerio)Imported |
Taxonomic identifieri | 7955 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Danionidae › Danioninae › Danio |
Proteomesi |
|
Organism-specific databases
ZFINi | ZDB-GENE-070112-652, ncaph |
Subcellular locationi
Cytoplasm and Cytosol
- Cytoplasm ARBA annotation
Other locations
- Chromosome ARBA annotation
Other locations
- condensin complex Source: ZFIN
- cytoplasm Source: UniProtKB-SubCell
Keywords - Cellular componenti
ChromosomeARBA annotation, CytoplasmARBA annotationExpressioni
Gene expression databases
Bgeei | ENSDARG00000061468, Expressed in blastula and 37 other tissues |
Structurei
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 81 | DisorderedSequence analysisAdd BLAST | 81 | |
Regioni | 162 – 204 | DisorderedSequence analysisAdd BLAST | 43 | |
Regioni | 355 – 378 | DisorderedSequence analysisAdd BLAST | 24 | |
Regioni | 531 – 568 | DisorderedSequence analysisAdd BLAST | 38 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 1 – 37 | Polar residuesSequence analysisAdd BLAST | 37 | |
Compositional biasi | 38 – 56 | Basic and acidic residuesSequence analysisAdd BLAST | 19 | |
Compositional biasi | 62 – 81 | Polar residuesSequence analysisAdd BLAST | 20 | |
Compositional biasi | 355 – 372 | Basic and acidic residuesSequence analysisAdd BLAST | 18 | |
Compositional biasi | 553 – 567 | Polar residuesSequence analysisAdd BLAST | 15 |
Sequence similaritiesi
Phylogenomic databases
eggNOGi | KOG2328, Eukaryota |
GeneTreei | ENSGT00390000004149 |
HOGENOMi | CLU_010510_1_0_1 |
InParanoidi | A2BG39 |
OMAi | EPQMRVY |
OrthoDBi | 702078at2759 |
TreeFami | TF105678 |
Family and domain databases
InterProi | View protein in InterPro IPR022816, Condensin_barren_su2 |
PANTHERi | PTHR13108, PTHR13108, 1 hit |
Pfami | View protein in Pfam PF05786, Cnd2, 1 hit |
PIRSFi | PIRSF017126, Condensin_H, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
A2BG39-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSAFSTPTAR QRQWSSPALG HKAALSTTST PLLDNIQGND DEQERRQRRR
60 70 80 90 100
SRVIDLHGVN DSSINEAGTH SSAGTPAAVP KLSSAQISEH YSTCIKLSTE
110 120 130 140 150
NKITTKNAFG LHLIDYMADI LKEKDSELNF KVAAGTLDAS TKIYAVRVDA
160 170 180 190 200
VHADAYRVLG GLGSETKPKE SQDGDDETEA AEGSQGEQVA AKQTKKRPPK
210 220 230 240 250
KTVEQNLSNI NLSESEMKCE VDPMFQRMAA SFDENSTAGV FLSVLFSEDS
260 270 280 290 300
CCELRFPSHM TLLKSQLPPV QVSHQNVPAS PFTGHLKTLE DRPICPSLED
310 320 330 340 350
FSFTRWTPEQ TTNLNQLLEK MKQGEHAFDV NADIEPDEDD APDFGDNFDA
360 370 380 390 400
DVDEGRPGDN EEFKEHKEAC SKSPQNGRGV IPIGEVDIAT MCLQLSDQPR
410 420 430 440 450
EYSYFSPRTM ATWVGPGYWL FKPGHKQDQK PDKEPRKRAP KNPLIIDFKA
460 470 480 490 500
DINFHNYFKT TRAATTISKS ALNTSNKKTT LPADFQYPPS NLSQLNLKPS
510 520 530 540 550
NTLSAEGKKR LSGELSEDIG EYNYNNANDT ANFCPGLQEG DSEDAEGFAG
560 570 580 590 600
SDDSQTDRPT PFSLDTDDIS TYGEDCLVPE PHKLNIIEIN YARTAKKMDM
610 620 630 640 650
KKLKTTMWGL LTESPEKTAK QVESEDTTEV PGEKSFSQSI RNLVQRLPSA
660 670 680 690
MATNLSVPLA FVALLHLANE KNLELHKIDG MTDIIIKQGH
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketA1L231 | A1L231_DANRE | Condensin complex subunit 2 | ncaph zgc:158618 | 690 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX323557 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSDART00000087684; ENSDARP00000082118; ENSDARG00000061468 ENSDART00000181434; ENSDARP00000147180; ENSDARG00000061468 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX323557 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 7955.ENSDARP00000082118 |
Proteomic databases
PaxDbi | A2BG39 |
Genome annotation databases
Ensembli | ENSDART00000087684; ENSDARP00000082118; ENSDARG00000061468 ENSDART00000181434; ENSDARP00000147180; ENSDARG00000061468 |
Organism-specific databases
ZFINi | ZDB-GENE-070112-652, ncaph |
Phylogenomic databases
eggNOGi | KOG2328, Eukaryota |
GeneTreei | ENSGT00390000004149 |
HOGENOMi | CLU_010510_1_0_1 |
InParanoidi | A2BG39 |
OMAi | EPQMRVY |
OrthoDBi | 702078at2759 |
TreeFami | TF105678 |
Gene expression databases
Bgeei | ENSDARG00000061468, Expressed in blastula and 37 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR022816, Condensin_barren_su2 |
PANTHERi | PTHR13108, PTHR13108, 1 hit |
Pfami | View protein in Pfam PF05786, Cnd2, 1 hit |
PIRSFi | PIRSF017126, Condensin_H, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | A2BG39_DANRE | |
Accessioni | A2BG39Primary (citable) accession number: A2BG39 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | February 20, 2007 |
Last sequence update: | February 20, 2007 | |
Last modified: | January 19, 2022 | |
This is version 87 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |