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UniProtKB - A2ATX5 (A2ATX5_DANRE)
Protein
Submitted name:
Internexin neuronal intermediate filament protein, alpha a
Gene
inaa
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Names & Taxonomyi
Protein namesi | Submitted name: Internexin neuronal intermediate filament protein, alpha aImported |
Gene namesi | Name:inaaImported |
Organismi | Danio rerio (Zebrafish) (Brachydanio rerio)Imported |
Taxonomic identifieri | 7955 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Danionidae › Danioninae › Danio |
Proteomesi |
|
Organism-specific databases
ZFINi | ZDB-GENE-060531-65, inaa |
Subcellular locationi
Cytoskeleton
- intermediate filament Source: ZFIN
- neurofilament Source: InterPro
Keywords - Cellular componenti
Intermediate filamentUniRule annotationARBA annotationExpressioni
Gene expression databases
Bgeei | ENSDARG00000011862, Expressed in retina and 24 other tissues |
Structurei
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 94 – 404 | IF rodInterPro annotationAdd BLAST | 311 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 18 – 66 | DisorderedSequence analysisAdd BLAST | 49 | |
Regioni | 423 – 474 | DisorderedSequence analysisAdd BLAST | 52 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 112 – 132 | Sequence analysisAdd BLAST | 21 | |
Coiled coili | 140 – 230 | Sequence analysisAdd BLAST | 91 | |
Coiled coili | 288 – 346 | Sequence analysisAdd BLAST | 59 | |
Coiled coili | 355 – 382 | Sequence analysisAdd BLAST | 28 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 25 – 66 | Polar residuesSequence analysisAdd BLAST | 42 | |
Compositional biasi | 429 – 468 | Basic and acidic residuesSequence analysisAdd BLAST | 40 |
Sequence similaritiesi
Belongs to the intermediate filament family.UniRule annotation
Keywords - Domaini
Coiled coilSequence analysisARBA annotationPhylogenomic databases
eggNOGi | ENOG502RAU0, Eukaryota |
GeneTreei | ENSGT00940000154418 |
HOGENOMi | CLU_012560_7_4_1 |
InParanoidi | A2ATX5 |
OMAi | MSYGDRY |
OrthoDBi | 888678at2759 |
PhylomeDBi | A2ATX5 |
TreeFami | TF330122 |
Family and domain databases
InterProi | View protein in InterPro IPR027703, Alpha-Inx IPR018039, IF_conserved IPR039008, IF_rod_dom IPR006821, Intermed_filament_DNA-bd |
PANTHERi | PTHR45652:SF18, PTHR45652:SF18, 1 hit |
Pfami | View protein in Pfam PF00038, Filament, 1 hit PF04732, Filament_head, 1 hit |
SMARTi | View protein in SMART SM01391, Filament, 1 hit |
PROSITEi | View protein in PROSITE PS00226, IF_ROD_1, 1 hit PS51842, IF_ROD_2, 1 hit |
i Sequence
Sequence statusi: Complete.
A2ATX5-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSYGSDHYMS SSYRKLFGDN PRFAGSRMSN VSPRSSMSSS GFRSQSVSRS
60 70 80 90 100
SASPAGYYKR SGRSSSFSPV HFDSVDFSQT SVLNNEFKIV RTNEKEQLQG
110 120 130 140 150
LNDRFAMFIE KVRNLEQHNK VLETELVSLR QRQNEPSRLA ELYQQEIRDL
160 170 180 190 200
RAQVDELNNE KSHILIERDS IEEDLQKLRG KFEEEIRARE EAEQTLRSYK
210 220 230 240 250
KDVDDATMVR VDLERKVESL LDEINFLRKV HDEEVTELTN MIQAAQISVE
260 270 280 290 300
VELSKPDLTS ALKDIRGQYE TLASKNLQSA EEWYKSKFAS LNEQATRTNE
310 320 330 340 350
AMRATREEVN DYRRQLQSKT IEIETLRGTN ESLERQIREM EEAHNAEVAG
360 370 380 390 400
YQETIGQLDL ELRNTKSEMA RHLREYQDLL NVKMALDIEI AAYRKLLEGE
410 420 430 440 450
ETHFSSGVTF SSTPSITYGY QSRSAFTSTR NPKKEREEEG HPKSKTAAKR
460 470
EENTDENVGI KKTEKNDAVD VNSN
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL928951 Genomic DNA No translation available. |
RefSeqi | NP_001138256.1, NM_001144784.1 |
Genome annotation databases
Ensembli | ENSDART00000027213; ENSDARP00000012437; ENSDARG00000011862 |
GeneIDi | 555251 |
KEGGi | dre:555251 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL928951 Genomic DNA No translation available. |
RefSeqi | NP_001138256.1, NM_001144784.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 7955.ENSDARP00000012437 |
Proteomic databases
PaxDbi | A2ATX5 |
PeptideAtlasi | A2ATX5 |
Genome annotation databases
Ensembli | ENSDART00000027213; ENSDARP00000012437; ENSDARG00000011862 |
GeneIDi | 555251 |
KEGGi | dre:555251 |
Organism-specific databases
CTDi | 555251 |
ZFINi | ZDB-GENE-060531-65, inaa |
Phylogenomic databases
eggNOGi | ENOG502RAU0, Eukaryota |
GeneTreei | ENSGT00940000154418 |
HOGENOMi | CLU_012560_7_4_1 |
InParanoidi | A2ATX5 |
OMAi | MSYGDRY |
OrthoDBi | 888678at2759 |
PhylomeDBi | A2ATX5 |
TreeFami | TF330122 |
Gene expression databases
Bgeei | ENSDARG00000011862, Expressed in retina and 24 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR027703, Alpha-Inx IPR018039, IF_conserved IPR039008, IF_rod_dom IPR006821, Intermed_filament_DNA-bd |
PANTHERi | PTHR45652:SF18, PTHR45652:SF18, 1 hit |
Pfami | View protein in Pfam PF00038, Filament, 1 hit PF04732, Filament_head, 1 hit |
SMARTi | View protein in SMART SM01391, Filament, 1 hit |
PROSITEi | View protein in PROSITE PS00226, IF_ROD_1, 1 hit PS51842, IF_ROD_2, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | A2ATX5_DANRE | |
Accessioni | A2ATX5Primary (citable) accession number: A2ATX5 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | February 20, 2007 |
Last sequence update: | February 20, 2007 | |
Last modified: | September 29, 2021 | |
This is version 106 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |