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Entry version 97 (13 Feb 2019)
Sequence version 1 (20 Feb 2007)
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Protein

BCL-6 corepressor-like protein 1

Gene

Bcorl1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Transcriptional corepressor. May specifically inhibit gene expression when recruited to promoter regions by sequence specific DNA-binding proteins such as BCL6. This repression may be mediated at least in part by histone deacetylase activities which can associate with this corepressor (By similarity).By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionChromatin regulator, Repressor
Biological processTranscription, Transcription regulation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
BCL-6 corepressor-like protein 1
Short name:
BCoR-L1
Short name:
BCoR-like protein 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Bcorl1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome X

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2443910 Bcorl1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003122691 – 1781BCL-6 corepressor-like protein 1Add BLAST1781

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei490PhosphoserineBy similarity1
Modified residuei593PhosphoserineBy similarity1
Modified residuei607PhosphoserineBy similarity1
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section describes <strong>covalent linkages</strong> of various types formed <strong>between two proteins (interchain cross-links)</strong> or <strong>between two parts of the same protein (intrachain cross-links)</strong>, except the disulfide bonds that are annotated in the <a href="http://www.uniprot.org/manual/disulfid">'Disulfide bond'</a> subsection.<p><a href='/help/crosslnk' target='_top'>More...</a></p>Cross-linki741Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity
Modified residuei1024PhosphoserineBy similarity1
Cross-linki1087Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity
Modified residuei1162PhosphoserineBy similarity1

Keywords - PTMi

Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
A2AQH4

PeptideAtlas

More...
PeptideAtlasi
A2AQH4

PRoteomics IDEntifications database

More...
PRIDEi
A2AQH4

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
A2AQH4

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
A2AQH4

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000036959 Expressed in 125 organ(s), highest expression level in ear vesicle

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
A2AQH4 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
A2AQH4 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with CTBP1. Interacts with HDAC4, HDAC5 and HDAC7 (By similarity). Interacts with PCGF1; the interaction is direct (By similarity).By similarity

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000039898

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
A2AQH4

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
A2AQH4

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati1493 – 1523ANK 1Add BLAST31
Repeati1527 – 1556ANK 2Add BLAST30
Repeati1560 – 1589ANK 3Add BLAST30

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi200 – 454Pro-richAdd BLAST255
Compositional biasi1253 – 1257Poly-Glu5
Compositional biasi1316 – 1319Poly-Glu4

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the BCOR family.Curated

Keywords - Domaini

ANK repeat, Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IFKH Eukaryota
ENOG411028G LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000153737

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000095190

The HOVERGEN Database of Homologous Vertebrate Genes

More...
HOVERGENi
HBG104815

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
A2AQH4

Identification of Orthologs from Complete Genome Data

More...
OMAi
NWFLFTD

Database of Orthologous Groups

More...
OrthoDBi
85469at2759

TreeFam database of animal gene trees

More...
TreeFami
TF333317

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00204 ANK, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.40.20, 1 hit
3.10.260.40, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
IPR032365 PUFD
IPR038227 PUFD_som_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF12796 Ank_2, 1 hit
PF16553 PUFD, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00248 ANK, 3 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48403 SSF48403, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

A2AQH4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MISTAPLYSG VHNWTSSDRI RMCGINEERR APLSDEESTT GGCQHFGSQE
60 70 80 90 100
FCVSSSFSKV ELTAVGSGSN ARGTNPDGNT TEKLGHRSED QSDDPQPKMD
110 120 130 140 150
YVGNPAEAEG LLVPLSSPGD GLKLPTPDST EASHSRANCS WTPLSTQMSK
160 170 180 190 200
QVDCSPAGVK ALDSRHGVGE KNTFILATLG TGVPVEGTLP LVTTNFSQLP
210 220 230 240 250
APICPPAPGS ASGTPSVPDP FQVPLSVPAP VPHSGLVPVQ VATSASAPSP
260 270 280 290 300
PLAPAAPSVP TLISDSNPLS VSASVLVPVP VSAPHSVPVP LSAPAPTPLT
310 320 330 340 350
VSVSAPPLAL IQAPVPPSAP TLVLASVPTP VLAPMPASTP PAAPAPPSVP
360 370 380 390 400
MPTPTPSSGP PSTPTLIPAF APTPVPAPTP APIFTPAPTP MPAATPAAIP
410 420 430 440 450
TSAPIPASFS LSRVCFPAAQ APAMQKVPLS FQPGTVLTPN QPLVYIPPPS
460 470 480 490 500
CGQPLSVATL PTTLGVSSTL TLPVLPSYLQ DRCLPGVLAS PDLRSYPCAF
510 520 530 540 550
SVARPLASDS KLVSLEVNRL SCTSPSSSTN SQPAPDGVPG PLADTSLTTA
560 570 580 590 600
SAKVLPTSQL LLPAPSGSSV PPHPSKMPGG TDQQTEGTSV TFSPLKSPPQ
610 620 630 640 650
LEREMASPPE CSEMPLDLSA KSNRQKLPLP NQRKTPPMPV LTPVHTSSKA
660 670 680 690 700
LLSTVLSRSQ RTTQAAGSNV TSCLGSTSSP FVIFPEMVRN GDPSTWVKNS
710 720 730 740 750
TALISTIPGT YVGVANPVPA SLLLNKDPNL GLNRDPRHLP KQEPISIIDQ
760 770 780 790 800
GEPKSTSATC GKKGSQAGAE GQPSTVKSRY TPARIAPGLP GCQTKELSLW
810 820 830 840 850
KPTGLTNMYP RCSINGKPTS TQVLPVGWSP YHQASLLSIG ISSAGQLTPS
860 870 880 890 900
QGVPIRPTSI VSEFSGVSPL GSSETVHGLP EGQPRPGGPF APEQDAVTKN
910 920 930 940 950
KNCRIAAKPY EEQVNPVLLT LSPQSGTLAL SVQPSSGDMG VNQGSEESES
960 970 980 990 1000
HLCSDSTPKM EGPQAACGLK LAGDTKPKNQ VLATYMSHEL VLANPQNLCK
1010 1020 1030 1040 1050
MPELPLLPHD SHSKELILDV VPSSERGPST DLSQLGSQVD LGRVKMEKAD
1060 1070 1080 1090 1100
GDVVFNLANC FRADGLPAVP QRGQAEARAN AGQARVKRES IGVFTCKNSW
1110 1120 1130 1140 1150
QPDEETESLP PKKVKCNKEK EIEEEPRQQP PPQPHDKPMV RSSLGSKCRK
1160 1170 1180 1190 1200
LPGDPQEPTK KSPRGALDSG KEHNGVRGKH KHRKPTKPES QPPGKRTDGH
1210 1220 1230 1240 1250
EEGSLEKKAK NSFRDFIPVV LSTRTRSQSG SICSSFAGMA DSDMGSQEVF
1260 1270 1280 1290 1300
PTEEEEEVAP TPAKRRKVRK TQRDTQYRSH HAQDKTLLSQ GRRHLWRARE
1310 1320 1330 1340 1350
MPWRTEAARQ MWDTNEEEED DEEEGLVKRK KRRRQKSRKY QTGEYLIEQE
1360 1370 1380 1390 1400
EQRRKGRADS KARKQKTSSQ SSEHCLRNRN LLLSSKAQGI SDSPNGFLPD
1410 1420 1430 1440 1450
NLEEPACLEN PEKPSGKRKC KTKHMANASE EARSKGRWSQ QKTRSSKSPT
1460 1470 1480 1490 1500
PVKPTEPCTP SKYRSAGPEE ASESPTARQI PPEARRLIVN KNAGETLLQR
1510 1520 1530 1540 1550
AARLGYKDVV LYCLQKHSED VNHRDNAGYT ALHEACSRGW TDILNILLQH
1560 1570 1580 1590 1600
GANVNCSSQD GTRPVHDAVV NDNLETIWLL LSYGADPTLA TYSGQTAMKL
1610 1620 1630 1640 1650
ASSDNMKRFL SDHLSDLQGR AEGDPRASWD FYSSSVLEKK DGFACDLLHN
1660 1670 1680 1690 1700
PPGSAEQGDD SEQDDFMFEL SDKPLLPCYN LQVSVSRGPC NWFLFSDVLK
1710 1720 1730 1740 1750
RLKLSSRIFQ ARFPHLEITT LPKAEFYRQV ASSQLLSPAE RPGSLEDRSP
1760 1770 1780
PGSSETVELV QYEPELLRLL GSEVEYQSWS S
Length:1,781
Mass (Da):190,487
Last modified:February 20, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC7A689F5D0A76A9F
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F8WJL9F8WJL9_MOUSE
BCL-6 corepressor-like protein 1
Bcorl1
1,693Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6ZBD9F6ZBD9_MOUSE
BCL-6 corepressor-like protein 1
Bcorl1
746Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
D6REH6D6REH6_MOUSE
BCL-6 corepressor-like protein 1
Bcorl1
48Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BAC27262 differs from that shown. Reason: Frameshift at position 1423.Curated
The sequence BAC27262 differs from that shown. Reason: Erroneous termination at position 1632. Translated as Tyr.Curated
The sequence BAC35708 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence BAC38112 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti1209A → V in BAC27262 (PubMed:16141072).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AL844594 Genomic DNA No translation available.
AK031119 mRNA Translation: BAC27262.1 Sequence problems.
AK054259 mRNA Translation: BAC35708.1 Different initiation.
AK081004 mRNA Translation: BAC38112.1 Different initiation.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS40961.1

NCBI Reference Sequences

More...
RefSeqi
NP_848897.3, NM_178782.4
XP_006541560.1, XM_006541497.3
XP_006541561.1, XM_006541498.3
XP_006541562.1, XM_006541499.3
XP_006541563.1, XM_006541500.3

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
Mm.210146

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000037596; ENSMUSP00000039898; ENSMUSG00000036959
ENSMUST00000136348; ENSMUSP00000122000; ENSMUSG00000036959

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
320376

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:320376

UCSC genome browser

More...
UCSCi
uc009tcc.1 mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844594 Genomic DNA No translation available.
AK031119 mRNA Translation: BAC27262.1 Sequence problems.
AK054259 mRNA Translation: BAC35708.1 Different initiation.
AK081004 mRNA Translation: BAC38112.1 Different initiation.
CCDSiCCDS40961.1
RefSeqiNP_848897.3, NM_178782.4
XP_006541560.1, XM_006541497.3
XP_006541561.1, XM_006541498.3
XP_006541562.1, XM_006541499.3
XP_006541563.1, XM_006541500.3
UniGeneiMm.210146

3D structure databases

ProteinModelPortaliA2AQH4
SMRiA2AQH4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000039898

PTM databases

iPTMnetiA2AQH4
PhosphoSitePlusiA2AQH4

Proteomic databases

PaxDbiA2AQH4
PeptideAtlasiA2AQH4
PRIDEiA2AQH4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000037596; ENSMUSP00000039898; ENSMUSG00000036959
ENSMUST00000136348; ENSMUSP00000122000; ENSMUSG00000036959
GeneIDi320376
KEGGimmu:320376
UCSCiuc009tcc.1 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
63035
MGIiMGI:2443910 Bcorl1

Phylogenomic databases

eggNOGiENOG410IFKH Eukaryota
ENOG411028G LUCA
GeneTreeiENSGT00940000153737
HOGENOMiHOG000095190
HOVERGENiHBG104815
InParanoidiA2AQH4
OMAiNWFLFTD
OrthoDBi85469at2759
TreeFamiTF333317

Miscellaneous databases

Protein Ontology

More...
PROi
PR:A2AQH4

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
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Gene expression databases

BgeeiENSMUSG00000036959 Expressed in 125 organ(s), highest expression level in ear vesicle
ExpressionAtlasiA2AQH4 baseline and differential
GenevisibleiA2AQH4 MM

Family and domain databases

CDDicd00204 ANK, 1 hit
Gene3Di1.25.40.20, 1 hit
3.10.260.40, 1 hit
InterProiView protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
IPR032365 PUFD
IPR038227 PUFD_som_sf
PfamiView protein in Pfam
PF12796 Ank_2, 1 hit
PF16553 PUFD, 1 hit
SMARTiView protein in SMART
SM00248 ANK, 3 hits
SUPFAMiSSF48403 SSF48403, 1 hit
PROSITEiView protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiBCORL_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A2AQH4
Secondary accession number(s): Q8BMH7, Q8BV26, Q8BW58
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 4, 2007
Last sequence update: February 20, 2007
Last modified: February 13, 2019
This is version 97 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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